Job Description P27248 Confidence 100.00% Date Thu Jan 5 11:43:27 GMT 2012 Rank 7 Aligned Residues 349 % Identity 34% Template c3girA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminomethyltransferase; PDBTitle: crystal structure of glycine cleavage system2 aminomethyltransferase t from bartonella henselae Resolution 1.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Q	Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	M	V	D	F	H	G	W	M	M	P	L	H	Y	G	.	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	M	F	D	V	S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G
Query Conservation																															.
Alig confidence																															.																																															.
Template Conservation																																																																														.
Template Sequence		K	T	L	P	L	Y	E	L	H	E	K	A	G	A	K	F	G	A	F	A	G	W	R	M	P	L	T	Y	P	L	G	V	L	K	E	H	L	H	T	R	A	H	A	G	L	F	D	I	S	H	M	K	L	I	A	V	E	G	P	K	A	V	E	F	L	S	Y	A	L	P	V	D	A	A	L	L	.	K	I	G
Template Known Secondary structure					T	T							T	T							T	T								T	T												S							T	T	S							S	T	T									S	S	S		T	T	T	S	.		T	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	T	V	R	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N
Query Conservation
Alig confidence																																																									.																							.	.
Template Conservation																																																									.																							.	.
Template Sequence		Q	S	R	Y	S	Y	L	L	N	E	R	A	G	I	L	D	D	L	I	L	T	R	L	A	E	C	R	F	M	L	V	A	N	A	G	N	A	Q	A	D	F	A	E	L	E	K	R	A	F	G	F	E	C	Q	V	.	I	A	L	E	R	V	L	L	A	L	Q	G	P	Q	A	A	A	V	L	A	D	A	.	.
Template Known Secondary structure		B									T	T														T	T								G	G	G												T	T	T	S	S				.												S	T	T								T	.	.
Template Predicted Secondary structure																																																									.																							.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		D	A	Q	R	Q	A	V	E	G	M	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E	A	G	.	V	K	P	C	G	L	G	A	R	D	T	L	R	L	E	A	G	M	N	L	Y	G	Q	E	M
Query Conservation																																																								.
Alig confidence		.	.																																																					.
Template Conservation		.	.
Template Sequence		.	.	G	L	P	G	N	E	L	L	F	M	Q	G	F	E	P	Q	Q	D	W	F	I	T	R	S	G	Y	T	G	E	D	G	F	E	I	A	L	P	I	G	C	A	R	A	L	A	E	K	L	L	G	D	S	R	V	E	W	V	G	L	A	A	R	D	S	L	R	L	E	A	G	L	C	L	H	G	N	D	I
Template Known Secondary structure		.	.	T				T	T			T	T	B				S	S	T	T					S			S	S	S	S	S																				T	S	T	T																T	T				B	T	T	T	B
Template Predicted Secondary structure		.	.
Template SS confidence
				169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																							.
Query SS confidence																		.																							.
Query Sequence		D	E	T	I	S	P	L	A	A	N	M	G	W	T	I	A	.	W	E	P	A	D	R	D	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	.	E	K	L	V	G	L	V	M	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T	S	G	T	F	S
Query Conservation																		.																							.
Alig confidence																		.																							.																							.	.	.
Template Conservation																																																																.	.	.
Template Sequence		T	P	D	T	T	P	I	D	A	A	L	T	W	A	V	P	K	N	V	R	E	K	A	Q	F	Y	G	A	K	A	F	L	E	S	L	Q	K	G	P	S	R	C	R	V	G	L	K	P	Q	T	R	Q	P	I	R	A	G	A	V	L	F	D	.	.	.	N	E	G	N	R	I	G	V	V	T	S	G	G	F	G
Template Known Secondary structure			T	T			T	T	T	T	T		G	G	G	S										S	T	T													S	S								S	S	S	S				T	T						.	.	.	T	T	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		P	T	L	G	Y	S	I	A	L	A	R	V	P	E	G	I	.	.	.	G	E	T	A	I	V	Q	I	R	N	R	E	M	P	V	K	V	T	K	P	V	F	V	R	N	G
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		P	S	F	D	G	P	V	A	M	G	Y	V	P	V	A	W	K	V	E	G	T	E	V	F	T	E	L	R	G	K	K	I	A	L	S	V	H	S	L	P	F	V	E	Q	R
Template Known Secondary structure		T	T	T	T										G	G	G		S	T	T								T	T										S		S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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