Job Description P27248 Confidence 12.05% Date Thu Jan 5 11:43:27 GMT 2012 Rank 31 Aligned Residues 141 % Identity 15% Template c2nyiB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:unknown protein; PDBTitle: crystal structure of an unknown protein from galdieria2 sulphuraria Resolution 1.80 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G	K	A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	.	.	.	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T
Query Conservation																																																													.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	S	F	V	V	S	V	A	G	S	D	R	V	G	I	V	H	D	F	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	N	I	S	A	N	V	E	S	S	R	X	A	C	L	G	G	D	F	A	X	I	V	L	V	S	L	N	A	K	D	G	K	L	I	Q	S	A	L	E
Template Known Secondary structure															T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T												T	T											S		S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.							140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.
Predicted Secondary structure															.	.	.	.	.	.																																																									.	.	.	.
Query SS confidence															.	.	.	.	.	.																																																									.	.	.	.
Query Sequence		Q	H	A	E	P	F	G	I	E	I	T	V	R	.	.	.	.	.	.	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N	D	A	Q	R	Q	A	V	E	G	M	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	.	.	.	.	E
Query Conservation															.	.	.	.	.	.																																																									.	.	.	.
Alig confidence															.	.	.	.	.	.																							.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		S	A	L	P	G	F	Q	I	S	T	R	R	A	S	H	V	S	P	D	T	R	E	Y	E	L	Y	V	E	G	P	D	S	E	G	I	V	E	A	V	T	A	.	.	.	.	.	.	.	V	L	A	K	K	G	A	N	I	V	E	L	E	T	E	T	L	P	A	P	F	A	G	F	T	L	F	R	X	G	S	R
Template Known Secondary structure				S	T	T													T	T														T	T								.	.	.	.	.	.	.					T	T														S	S	T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	F	P	F	P	L	Y	Q	E	V	V	T	A	L	S	R
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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