Job Description P27248 Confidence 100.00% Date Thu Jan 5 11:43:27 GMT 2012 Rank 8 Aligned Residues 351 % Identity 39% Template c1yx2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminomethyltransferase; PDBTitle: crystal structure of the probable aminomethyltransferase2 from bacillus subtilis Resolution 2.08 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	M	V	D	F	H	G	W	M	M	P	L	H	Y	G	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	M	F	D	V	S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G	K
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		K	R	T	P	L	F	D	L	Y	K	E	Y	G	G	K	T	I	D	F	G	G	W	E	L	P	V	Q	F	S	S	I	K	K	E	H	E	A	V	R	T	A	A	G	L	F	D	V	S	H	X	G	E	V	E	V	S	G	N	D	S	L	S	F	L	Q	R	L	X	T	N	D	V	S	A	L	.	T	P	G	R
Template Known Secondary structure		B			T	T	G	G	G					T							T	T							S	S												S							T	T	S							S	T	T									B	S	S		G	G	G		.		T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	T	V	R	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	Y	T	A	X	C	Y	P	D	G	G	T	V	D	D	L	L	I	Y	Q	K	G	E	N	R	Y	L	L	V	I	N	A	S	N	I	D	K	D	L	A	W	X	K	E	H	A	A	G	D	V	Q	I	D	N	Q	S	D	Q	I	A	L	L	A	V	Q	G	P	K	A	E	A	I	L	K	N	L	T	D	A
Template Known Secondary structure										T	T	S													T	T								G	G	G														S	S							T	T	T								S	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure												.																																											.	.	.	.
Query SS confidence												.																																											.	.	.	.
Query Sequence		A	Q	R	Q	A	V	E	G	M	K	.	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E	A	.	.	.	.	G	V	K	P	C	G	L	G	A	R	D	T	L	R	L	E	A	G	M	N	L	Y	G
Query Conservation												.																																											.	.	.	.
Alig confidence												.																																											.	.	.	.
Template Conservation
Template Sequence		D	V	S	A	L	K	P	F	A	F	I	D	E	A	D	I	S	G	R	K	A	L	I	S	R	T	G	Y	T	G	E	D	G	Y	E	I	Y	C	R	S	D	D	A	X	H	I	W	K	K	I	I	D	A	G	D	A	Y	G	L	I	P	C	G	L	G	A	R	D	T	L	R	F	E	A	N	I	P	L	Y	G
Template Known Secondary structure				T	T			T	T	B								T	T							S			S	S	S	S									G	G	G													G	G	G	T																T	T				B	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		Q	E	M	D	E	T	I	S	P	L	A	A	N	M	G	W	T	I	A	W	E	P	A	D	R	D	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	.	E	K	L	V	G	L	V	M	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T	S	G	T
Query Conservation																																											.
Alig confidence																							.																				.																							.	.	.	.
Template Conservation																							.																																											.	.	.	.
Template Sequence		Q	E	L	T	R	D	I	T	P	I	E	A	G	I	G	F	A	V	K	H	K	.	K	E	S	D	F	F	G	K	S	V	L	S	E	Q	K	E	N	G	A	K	R	K	L	V	G	L	E	X	I	E	K	G	I	P	R	H	G	Y	E	V	F	Q	.	.	.	.	N	G	K	S	V	G	K	V	T	T	G	T
Template Known Secondary structure		T	T	B	B	T	T	B		T	T	T	T	T		G	G	G			T	T	.		S	S			T	T													S									S	S	S					T	T						.	.	.	.	T	T
Template Predicted Secondary structure																							.																																											.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.					.	.	.	.	.	310	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		F	S	P	T	L	G	Y	S	I	A	L	A	R	V	P	E	G	I	.	.	.	G	E	T	A	I	V	Q	I	R	N	R	E	M	P	V	K	V	T	K	P	V	F	V	R	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		Q	S	P	T	L	G	K	N	V	G	L	A	L	I	D	S	E	T	S	E	I	G	T	V	V	D	V	E	I	R	K	K	L	V	K	A	K	V	V	K	T	P	F	Y	K	R
Template Known Secondary structure				T	T	T	T										G	G	G		S	T	T								T	T										S		S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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