Job Description P27248 Confidence 100.00% Date Thu Jan 5 11:43:27 GMT 2012 Rank 5 Aligned Residues 353 % Identity 41% Template c1worA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminomethyltransferase; PDBTitle: crystal structure of t-protein of the glycine cleavage2 system Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	M	V	D	F	H	G	W	M	M	P	L	H	Y	G	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	M	F	D	V	S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G	K
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		K	R	T	P	L	F	E	K	H	V	E	L	G	A	K	M	V	D	F	A	G	W	E	M	P	L	Y	Y	T	S	I	F	E	E	V	M	A	V	R	K	S	V	G	M	F	D	V	S	H	M	G	E	F	L	V	K	G	P	E	A	V	S	F	I	D	F	L	I	T	N	D	F	S	S	L	.	P	D	G	K
Template Known Secondary structure		B			T	T							T	T							T	T							S	S												S							T	T	S							S	T	T									B	S	S			S	S		.		T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	.	T	V	R	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		A	I	Y	S	V	M	C	N	E	N	G	G	I	I	D	D	L	V	V	Y	K	V	S	P	D	E	A	L	M	V	V	N	A	A	N	I	E	K	D	F	N	W	I	K	S	H	S	K	N	F	D	V	E	V	S	N	I	S	D	T	T	A	L	I	A	F	Q	G	P	K	A	Q	E	T	L	Q	E	L	V	E
Template Known Secondary structure										T	T	S													T	T								G	G	G										T	T		T	T	S	S							G	G	G								S	T	T						G	G	G	B	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		D	A	Q	R	Q	A	V	E	G	M	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E	A	.	.	.	.	G	V	K	P	C	G	L	G	A	R	D	T	L	R	L	E	A	G	M	N	L	Y	G
Query Conservation																																																							.	.	.	.
Alig confidence																																																							.	.	.	.
Template Conservation
Template Sequence		D	G	L	E	E	I	A	Y	Y	S	F	R	K	S	I	V	A	G	V	E	T	L	V	S	R	T	G	Y	T	G	E	D	G	F	E	L	M	L	E	A	K	N	A	P	K	V	W	D	A	L	M	N	L	L	R	K	I	D	G	R	P	A	G	L	G	A	R	D	V	C	R	L	E	A	T	Y	L	L	Y	G
Template Known Secondary structure		S		S	T	T	S		T	T	B							T	T							S			S	S	S	S	S								G	G	G													T	T	T	T																T	T				B	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	M	D	E	T	I	S	P	L	A	A	N	M	G	W	T	I	A	W	E	P	A	D	R	D	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	E	K	L	V	G	L	V	M	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T	S	G	T	F
Query Conservation
Alig confidence																				.	.					.																																							.	.	.	.
Template Conservation																				.	.					.																																							.	.	.	.
Template Sequence		Q	D	M	D	E	N	T	N	P	F	E	V	G	L	S	W	V	V	.	.	K	L	N	K	.	D	F	V	G	K	E	A	L	L	K	A	K	E	K	V	E	R	K	L	V	A	L	E	L	S	G	K	R	I	A	R	K	G	Y	E	V	L	K	.	.	.	.	N	G	E	R	V	G	E	I	T	S	G	N	F
Template Known Secondary structure		T	T	B		T	T	S		G	G	G	G	T		G	G	G		.	.		T	T	S	.			T	T																					S	S	S					T	T						.	.	.	.	T	T
Template Predicted Secondary structure																				.	.					.																																							.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.	.	.	310	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																			.	.									.
Query SS confidence																			.	.									.
Query Sequence		S	P	T	L	G	Y	S	I	A	L	A	R	V	P	E	G	I	.	.	G	E	T	A	I	V	Q	I	.	R	N	R	E	M	P	V	K	V	T	K	P	V	F	V	R	N	G	K	A	V
Query Conservation																			.	.									.
Alig confidence																			.	.									.
Template Conservation
Template Sequence		S	P	T	L	G	K	S	I	A	L	A	L	V	S	K	S	V	K	I	G	D	Q	L	G	V	V	F	P	G	G	K	L	V	E	A	L	V	V	K	K	P	F	Y	R	G	S	V	R	R
Template Known Secondary structure			T	T	T	T										T	T			T	T								T	T	T										S		S				S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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