Job Description P27248 Confidence 100.00% Date Thu Jan 5 11:43:27 GMT 2012 Rank 1 Aligned Residues 360 % Identity 96% Template c1vloA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminomethyltransferase; PDBTitle: crystal structure of aminomethyltransferase (t protein;2 tetrahydrofolate-dependent) of glycine cleavage system (np417381)3 from escherichia coli k12 at 1.70 a resolution Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	M	V	D	F	H	G	W	M	M	P	L	H	Y	G	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	M	F	D	V	S	H	M	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	P	L	Y	E	Q	H	T	L	C	G	A	R	X	V	D	F	H	G	W	X	X	P	L	H	Y	G	S	Q	I	D	E	H	H	A	V	R	T	D	A	G	X	F	D	V	S	H	X	T	I	V	D	L	R	G	S	R	T	R	E	F	L	R	Y	L	L	A	N	D	V	A	K	L	T	K	S	G	K	A
Template Known Secondary structure				T	T							T	T							T	T							S	S												S							T	T	S							S	T	T									B	S	S		G	G	G			S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	S	G	M	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	T	V	R	D	D	L	S	M	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	S	G	X	L	N	A	S	G	G	V	I	D	D	L	I	V	Y	Y	F	T	E	D	F	F	R	L	V	V	N	S	A	T	R	E	K	D	L	S	W	I	T	Q	H	A	E	P	F	G	I	E	I	T	V	R	D	D	L	S	X	I	A	V	Q	G	P	N	A	Q	A	K	A	A	T	L	F	N	D	A
Template Known Secondary structure									T	T	S													T	T								G	G	G													G	G	G	T							T	T								S	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	Q	A	V	E	G	M	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E	A	G	V	K	P	C	G	L	G	A	R	D	T	L	R	L	E	A	G	M	N	L	Y	G	Q	E	M	D	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	Q	A	V	E	G	X	K	P	F	F	G	V	Q	A	G	D	L	F	I	A	T	T	G	Y	T	G	E	A	G	Y	E	I	A	L	P	N	E	K	A	A	D	F	W	R	A	L	V	E	A	G	V	K	P	C	G	L	G	A	R	D	T	L	R	L	E	A	G	X	N	L	Y	G	Q	E	X	D	E	T
Template Known Secondary structure							T	T			S	S	B					T	T								S	S	S	S																						T	T																T	T				B	T	T	T	B		T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	P	L	A	A	N	M	G	W	T	I	A	W	E	P	A	D	R	D	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	E	K	L	V	G	L	V	M	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T	S	G	T	F	S	P	T	L	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	P	L	A	A	N	X	G	W	T	I	A	W	E	P	A	D	R	D	F	I	G	R	E	A	L	E	V	Q	R	E	H	G	T	E	K	L	V	G	L	V	X	T	E	K	G	V	L	R	N	E	L	P	V	R	F	T	D	A	Q	G	N	Q	H	E	G	I	I	T	S	G	T	F	S	P	T	L	G	Y
Template Known Secondary structure		S		G	G	G	T	T		G	G	G					S	T	T				T	T																						S	S	S				T	T								T	T															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	A	L	A	R	V	P	E	G	I	G	E	T	A	I	V	Q	I	R	N	R	E	M	P	V	K	V	T	K	P	V	F	V	R	N	G	K	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	A	L	A	R	V	P	E	G	I	G	E	T	A	I	V	Q	I	R	N	R	E	X	P	V	K	V	T	K	P	V	F	V	R	N	G	K	A	V
Template Known Secondary structure										T	T			S							T	T										S					T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions