Job Description P75683 Confidence 2.30% Date Thu Jan 5 12:13:04 GMT 2012 Rank 99 Aligned Residues 178 % Identity 10% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	V	K	Y	V	M	D	H	P	E	L	A	T	Q	F	L	L	Y	G	S	L	A	T	M	F	G	S	L	C	S	S	R	L	L	G	R	F	D	R	V	T	A	F	K	W	I	I	V	A	Y	S	L	I	S	L	L	I	F	V	T	P	A	E	H	I	A	L	I	F	A	L	N	I	L	F	L	F	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	R	L	P	S	S	F	L	P	D	S	G	N	Q	A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L
Template Known Secondary structure				S	S		B		S	S					T	T																			T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		N	T	T	T	P	L	Q	W	L	M	A	S	D	V	V	D	Y	E	E	S	R	S	G	R	R	L	D	G	L	V	F	S	T	Y	L	F	S	L	K	I	G	L	A	I	G	G	A	V	V	G	W	I	L	A	Y	V	N	Y	S	A	S	S	.	S	V	Q	P	V	E	V	L	T	T	I	K	I	L	F	C	V
Query Conservation																																																																.
Alig confidence									.	.																																																						.
Template Conservation									.	.
Template Sequence		S	A	K	N	A	I	L	.	.	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L	G	V	M	P	L	V	I	S	T	G	A	G	S	G	A	Q	N	A	V	G	T	G	V	M	G	G	M	V	T	A	T
Template Known Secondary structure									.	.									T	T	S	S				T	T									T	T																				T	T		S	S	S
Template Predicted Secondary structure									.	.
Template SS confidence
		938	.	940	.	.	.	.			.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	V	V	L	Y	A	G	M	F	I	M	L	S	L	Y	K	L	T	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	I	F	F	V	P	V	F	F	V	V	V	R	R	R	F	S	R	K
Template Known Secondary structure		T	T	T	T	S	S	S	S	S	S								T	S
Template Predicted Secondary structure
Template SS confidence
		1016	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions