Job Description Q47141 Confidence 99.72% Date Thu Jan 5 12:36:18 GMT 2012 Rank 26 Aligned Residues 204 % Identity 22% Template d1i6aa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	Q	L	T	I	G	F	V	P	S	A	E	V	N	L	L	P	K	V	L	P	M	F	R	L	R	Q	P	D	T	L	I	E	L	V	S	L	I	T	T	Q	Q	E	E	K	I	R	R	G	E	L	D	V	G	L	M	R	H	P	V	Y	S	P	E	I	D	Y	L	E	L	F	D	E	P	L	V	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	P	L	H	I	G	L	I	P	T	V	G	P	Y	L	L	P	H	I	I	P	M	L	H	Q	T	F	P	K	L	E	M	Y	L	H	E	A	Q	T	H	Q	L	L	A	Q	L	D	S	G	K	L	D	A	V	I	L	A	L	V	K	E	S	E	A	F	I	E	V	P	L	F	D	E	P	M	L	L	A	I
Template Known Secondary structure											T	T	T																	T	T																				T	S		S								G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		P	V	D	H	P	L	A	H	E	K	E	I	T	A	A	Q	L	D	G	V	N	F	V	S	T	D	P	V	Y	S	G	S	L	A	P	I	V	K	A	W	F	A	Q	E	N	S	Q	P	N	I	V	Q	V	A	T	N	I	L	V	T	M	N	L	V	G	M	G	L	G	V	T	L	I	P	G	Y	M	N	N	.
Query Conservation																																																																																	.
Alig confidence																														.	.																																																		.
Template Conservation																														.	.
Template Sequence		Y	E	D	H	P	W	A	N	R	E	A	V	P	M	A	D	L	A	G	E	K	L	L	M	L	E	D	G	.	.	H	C	L	R	D	Q	A	M	G	F	C	F	E	A	G	A	D	E	D	T	H	F	R	A	T	S	L	E	T	L	R	N	M	V	A	A	G	S	G	I	T	L	L	P	A	L	A	V	P	P
Template Known Secondary structure			T	T	S	G	G	G	G		S				G	G	G	G	T	T	S						T	T	T	.	.	T		S	S		T	T	S	S		S	S		T	T	S					T	T	T	T	S											T	T	S		B					G	G	G	S		S
Template Predicted Secondary structure																														.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
			248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.																												.
Query SS confidence		.																												.
Query Sequence		.	F	N	T	G	Q	V	V	F	R	P	I	A	G	N	V	P	S	I	A	L	L	M	A	W	K	K	G	.	E	M	K	P	A	L	R	D	F	I	A	I	V	Q	E	R	L	A	S	V
Query Conservation		.																												.
Alig confidence		.																												.
Template Conservation
Template Sequence		E	R	K	R	D	G	V	V	Y	L	P	A	I	K	P	E	P	R	R	T	I	G	L	V	Y	R	P	G	S	P	L	R	S	R	Y	E	Q	L	A	E	A	I	R	A	R	M	D	G	H
Template Known Secondary structure		S	S			T	T								S	S												T	T		T	T																T	T	T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions