Job Description Q47141 Confidence 96.77% Date Thu Jan 5 12:36:18 GMT 2012 Rank 96 Aligned Residues 90 % Identity 16% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.					.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.	.	.																																						.	.	.	.	.
Query SS confidence																		.	.	.	.																																						.	.	.	.	.
Query Sequence		M	E	L	R	H	L	R	Y	F	V	A	V	A	Q	A	L	.	.	.	.	N	F	T	R	A	A	E	K	L	H	T	S	Q	P	S	L	S	S	Q	I	R	D	L	E	N	C	V	G	V	P	L	L	V	R	D	K	R	.	.	.	.	.	K	V	A	L	T	A	A	G	E	C	F	L	Q	D	A	L	A	I
Query Conservation																		.	.	.	.																																						.	.	.	.	.
Alig confidence																		.	.	.	.																											.											.	.	.	.	.
Template Conservation																																																.
Template Sequence		M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	.	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L
Template Known Secondary structure		S													S		S		S											S	S	S		G	G	G	T										T	.	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	A	E	N	A	K	L	R	A	R	K	I	V	Q	E	D	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P
Template Known Secondary structure													T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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