Job Description P52140 Confidence 70.49% Date Thu Jan 5 12:05:45 GMT 2012 Rank 6 Aligned Residues 84 % Identity 10% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Y	L	N	Q	Q	N	Q	L	I	A	H	E	T	L	F	A	G	S	I	S	S	T	E	V	H	P	R	E	V	V	K	R	A	L	Y	F	N	A	A	A	V	I	L	A	H	N	H	P	S	G	D	T	T	P	S	Q	A	D	K	T	I	T	Q	R	L	V	Q	A	L	Q	L	V	D	I	R	V	P	D
Query Conservation
Alig confidence																																																											.	.														.	.	.	.	.	.	.	.
Template Conservation																																																											.	.														.	.	.	.	.	.	.	.
Template Sequence		V	V	A	I	D	A	K	R	V	D	G	E	F	M	V	F	T	Y	S	G	K	K	N	T	G	I	L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	.	.	D	T	E	M	I	R	F	V	R	P	L	T	T	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T																											T	T		S							S	S	S		S	S	S	S			.	.									G	G	G			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.														.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	I	V	G	G	R	Q	I	Y	S	F	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	I	I	A	S	G	G	A	G	K	M	E	H
Template Known Secondary structure		S						S				S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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