 |
Job Description | P52140 | Confidence | 7.13% | Date | Thu Jan 5 12:05:45 GMT 2012 |
Rank | 87 | Aligned Residues | 37 |
% Identity | 16% | Template | c3a3eB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:penicillin-binding protein 4; |
PDBTitle: crystal structure of penicillin binding protein 4 (dacb)2 from haemophilus influenzae, complexed with novel beta-3 lactam (cmv)
|
Resolution | 2.40 Å |
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | D | T | T | P | S | Q | A | D | K | T | I | T | Q | R | L | V | Q | A | L | Q | L | V | D | I | R | V | P | D | H | L | I | V | G | G | R | Q | I | Y |
Query Conservation |   |
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |   |   |   |
| . | . | . |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|   |
|   |
|   |
|
Template Sequence |   |
T | G | D | P | D | L | T | R | G | Q | L | . |
. |
. |
Y | S | L | L | A | E | L | K | K | Q | G | I | K | K | I | N | G | D | L | V | L | D | T | S | V | F |
Template Known Secondary structure |   |
|
|
| S | S |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |
| S |
|  |  |  |  |
|
| B |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | |
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|