Job Description P52140 Confidence 8.91% Date Thu Jan 5 12:05:45 GMT 2012 Rank 73 Aligned Residues 43 % Identity 19% Template c2j8qB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion. Resolution 2.3 Å

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		102	.	.	.	.	.	.	.	110	.																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	A	V	I	L	A	H	N	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	G	D	T	T	P	S	Q	A	D	K	T	I	T	Q	R	L	V	Q	A	L	Q	L	V	D	I	R	V	P	D	H	L	I	V	G	G
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.												.	.
Template Conservation																																												.	.												.	.
Template Sequence		V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	.	.	K	R	L	M	T	E	I	L	G	R	Q	.	.	D	D	W	V	I	D	D
Template Known Secondary structure										S	S	S										S	T	T					S						T	T								.	.												.	.
Template Predicted Secondary structure																																												.	.												.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions