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Job DescriptionP40874
Confidence100.00%DateThu Jan 5 12:01:17 GMT 2012
Rank13Aligned Residues272
% Identity44%Templated2gf3a1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEED
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Template Sequence  HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK
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STT


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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE
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Template Sequence  IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA
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TT

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  AGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTGE
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Template Sequence  RGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGAWNSKL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

S


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   163......170.........180.........190.........200........
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  LPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVASDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIID
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSKLNLDIPDEHFIID
Template Known Secondary structure  ................................................................GGGGT





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   209210.........220....
 
   322.......330.........340.........350.........360.........370.
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Query Sequence  TLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRF
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Template Sequence  LHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKTEHDISIFSINRP
Template Known Secondary structure  TT

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   329330.........340.........350.........360.........370........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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