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Job DescriptionP40874
Confidence99.58%DateThu Jan 5 12:01:17 GMT 2012
Rank27Aligned Residues306
% Identity14%Templated1o5wa1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.....
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Query Sequence  YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYG. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGGRTYTVRNEHVKWVDVGGAYVGPTQNRILRLSKELGIETYKVNV
Template Known Secondary structure 

STT


SSSSS
TTS


TTTS
SS


B
TT
TT




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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   56...60.........70.........80.........90.........100..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . EGEKYVPLVLRAQTLWDELSRHNEEDPIFVRSGVINLGPADSTFLAN. . . . . . . . . . .
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Template Sequence  NERLVQYVKGKTYPFRGAFPPVWNPLAYLDYNNLWRTMDEMGKEIPVDAPWQARHAQEWDKMTMKDLIDKICWTKTAREF
Template Known Secondary structure  SS

SS

SSS



STS
TT
GGGSTTTTSB

S
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   103......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  . VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG
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Template Sequence  AYLFVNINVTSEPHEVSALWFLWYVRQCGGTARIFSVTNGGQERKFVGGSGQVSEQIMGLLGDKVKLSSPVTYIDQTDDN
Template Known Secondary structure  SS
TTTSBT
SSSSTTSTT
TTTTGGGSS


SSSS
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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   182.......190 .........200.........210.........220.........230.........240.........250.........260
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Query Sequence  VTIETADGE. YQAKKAIVCAGTWVKDLLPELPVQPVRKVFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKI
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Template Sequence  IIVETLNHEHYECKYVISAIPP. . . ILTAKIHFKP. . . . . . . . . . ELPPERNQLIQRLFPPGIMTQYGRVIRQPVGRIYF
Template Known Secondary structure  SSS

S
G...GGGGGSSS..........


TT



TTTGGGTT


SS
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   254.....260.........270..... ....280..... ....290.........300.........310.........320
 
   261........270.........280.........290.. .......300.........310.........320..
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Query Sequence  GKHNGGQVIHSADERVPFAEVASDGSEAFPFL. . . . . . . . . . . . . . RNVLPGIGCCLYGAACTYDNSPDEDFIIDT
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Template Sequence  AGTETATQWSGY. MEGAVEAGERAAREVLNALGKVAKKDIWVEEPESKDVPAIEITHTFLERNLPSVPGLLKITGV
Template Known Secondary structure 
SGGG
SSSTTS.TTTSS
SSTTS





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   433......440.... .....450.........460.........470.........480.........490.........500.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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