Job Description P40874 Confidence 99.37% Date Thu Jan 5 12:01:17 GMT 2012 Rank 43 Aligned Residues 325 % Identity 15% Template c3ihgA_ PDB info PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone Resolution 2.49 Å

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		1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		M	K	.	.	.	Y	D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	L	S	R	H
Query Conservation				.	.	.
Alig confidence				.	.	.																																							.	.	.	.	.	.	.	.	.	.													.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.													.
Template Sequence		M	N	D	H	E	V	D	V	L	V	V	G	A	G	L	G	G	L	S	T	A	M	F	L	A	R	Q	G	V	R	V	L	V	V	E	R	R	P	G	L	S	P	Y	.	.	.	.	.	.	.	.	.	.	P	R	A	A	G	Q	N	P	R	T	M	E	.	L	L	R	I	G	G	V	A	D	E	V	V	R	A
Template Known Secondary structure						S									S												T	T	T								S	S	S	S					.	.	.	.	.	.	.	.	.	.			S			B							.					T	T								S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.											.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.									.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		N	E	E	D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	.	.	.	.	.	.	.	.	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	I	R	G	T	Q	G	D	F	V	I	R	L	A	E	S	V	R	G	E	I	L	R	T	V	S	E	S	F	D	D	M	V	A	A	T	E	P	C	T	P	A	G	W	A	M	L	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		T	T	S								S	S	S	S	S								S								T	T	G	G	G		S				B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Query Sequence		L	A	I	K	T	W	I	Q	L	A	K	E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	.	.	.	.	.	.	.	G	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	L	P	V	.	.	.	.	.	.	Q	P	V
Query Conservation																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	E	P	I	L	L	A	Q	A	R	K	H	G	G	A	I	R	F	G	T	R	L	L	S	F	R	Q	H	D	D	D	A	G	A	G	V	T	A	R	L	A	G	P	D	G	E	Y	D	L	R	A	G	Y	L	V	G	A	D	G	N	R	S	L	V	R	E	S	L	G	I	G	R	Y	G	H	G	T	L	T
Template Known Secondary structure														T	T					S	S											G	G	G		S									T	T																T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	V	K	N	K	F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	F	P	F	L	R	N	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	M	V	G	V	I	F	D	A	D	L	S	G	I	M	E	P	G	T	T	G	W	Y	Y	L	H	H	P	E	F	K	G	T	F	G	P	T	D	R	P	D	R	H	T	L	F	V	E	Y	D	P	D	E	G	E	R	P	E	D	F	T	P	Q	R	C	V	E	L	I	G	L	A	L	D	A	P	E	V	K	P
Template Known Secondary structure												G	G	G	T	S		T	T										S	S									S	S	T	T										T	T	T	T			G	G	G															T		S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		297	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure						.	.																																													.	.	.	.
Query SS confidence						.	.																																													.	.	.	.
Query Sequence		P	G	I	G	.	.	C	C	L	Y	G	A	A	C	T	Y	D	N	S	P	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	.	.	.	.	V	L	G	E	I	A	A	D	F	A	Q	D	K	K	S	D	F	D	L	T	P	F	R	L	S	R
Query Conservation						.	.																																													.	.	.	.
Alig confidence						.	.																								.	.	.	.	.																	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		E	L	V	D	I	Q	G	W	E	M	A	A	R	I	A	E	R	W	R	E	G	R	V	F	L	A	G	D	A	.	.	.	.	.	A	K	V	T	P	P	T	G	G	M	S	G	N	A	A	V	A	D	G	F	D	L	A	W	K	L	A	A	V	L	Q	G	Q	A	G	A	G	L	L	D	T	Y	E	D	E	R
Template Known Secondary structure																	S		S			T	T					T	T	T	.	.	.	.	.	T					S	T	T	S																						T	T	S	S		T	T
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.						310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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