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Job DescriptionP40874
Confidence100.00%DateThu Jan 5 12:01:17 GMT 2012
Rank12Aligned Residues342
% Identity16%Templatec3dmeB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:conserved exported protein; PDBTitle: crystal structure of conserved exported protein from2 bordetella pertussis. northeast structural genomics target3 ber141
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAH. MPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEE
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Template Sequence  DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGV
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Query Sequence  DPIFVRSGVINLGPADSTFLANVAHSAEQ. WQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLA
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Template Sequence  PHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTA. . . ALVSPSTGIVDSHALMLAYQGDA
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Query Sequence  KEAGCAQLFNCPVTAIRHDDDGVTIET. . . . ADGEYQAKKAIVCAGTWVKDLLPE. . . . . . . . . LPVQPVRKVFAWYQAD
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Template Sequence  ESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGR
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Query Sequence  GRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNG. GQVIHSADERVPFAEVASDGSEAFPFLRNVLPGIGCCLYG
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Template Sequence  APFSR. . . . LIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIATEDYTLDPRRADVFYAAVRSYWPALPDG. . . . . ALAPG
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Query Sequence  AACTYDNSPDEDFIID. . . . . . . TLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQ
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Template Sequence  YTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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