Job Description P40874 Confidence 98.43% Date Thu Jan 5 12:01:17 GMT 2012 Rank 229 Aligned Residues 338 % Identity 14% Template c3c4nB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein dr_0571; PDBTitle: crystal structure of dr_0571 protein from deinococcus2 radiodurans in complex with adp. northeast structural3 genomics consortium target drr125 Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		Y	D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	.	.	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	L	S	R	H	N	E	E
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		F	D	I	V	V	I	G	A	G	R	X	G	A	A	C	A	F	Y	L	R	Q	L	A	P	G	R	S	L	L	L	V	E	E	G	G	L	P	N	E	E	G	A	T	I	L	A	P	G	V	W	T	A	Q	D	I	P	A	G	Q	E	A	Q	A	E	W	T	R	E	Q	L	L	G	A	L	G	S	G	K	T	L
Template Known Secondary structure										S															T	T	S							S	S		S	S		T	T	S											G	G	G			T	T														T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T	W	I	Q	L	A	K
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	E	D	R	P	L	L	H	L	L	P	A	G	E	G	S	G	L	T	P	T	L	D	A	L	A	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	L	A	L	L	D	P	A	R	L	P	V	A	R	V	D	P	R	A	L	T	Y	R	P	G	S	L	A	L	L	A	A	Q	Q	A	I
Template Known Secondary structure													S	S			S	S	S								T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S		T	T	T	S							T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																				.
Query SS confidence																	.	.																																				.
Query Sequence		E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	.	.	R	H	D	D	D	G	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	.	L	P	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	V	K	N	K	F	P	A
Query Conservation																	.	.																																				.
Alig confidence																	.	.																																				.
Template Conservation
Template Sequence		G	Q	G	A	G	L	L	L	N	T	R	A	E	L	V	P	G	G	V	R	L	H	R	L	T	V	V	H	E	T	R	Q	I	R	A	G	V	I	I	V	A	A	G	A	A	G	P	A	L	V	E	Q	G	L	G	L	H	T	R	H	G	R	A	Y	R	Q	F	P	R	L	D	L	L	S	G	A	Q	T	P	V
Template Known Secondary structure		T	T	T						S							T	T							B				B															G	G	G																											S				T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		238					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300					.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																																																			.	.													.	.	.	.
Query SS confidence			.	.	.	.																																																			.	.													.	.	.	.
Query Sequence		F	.	.	.	.	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	.	.	F	P	F	L	R	N	V	L	P	G	I	G	.	.	.	.	C	C	L	Y	G	A	A
Query Conservation			.	.	.	.																																																			.	.													.	.	.	.
Alig confidence			.	.	.	.																																																			.	.													.	.	.	.
Template Conservation
Template Sequence		L	R	A	S	G	L	T	L	R	P	Q	N	G	G	Y	T	L	V	P	A	I	H	H	R	D	P	H	G	Y	H	P	A	G	G	S	L	T	G	V	P	T	G	L	R	R	E	L	L	E	D	L	V	G	L	X	D	A	V	P	A	L	A	G	E	G	L	E	L	G	R	S	S	A	D	V	P	G	A	W	L
Template Known Secondary structure					T	T							T	T										S		B		S	S								B	T	T	B			S	S												T	T	T		G	G	G	T	S	S		B				S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	Y	D	N	S	P	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V	L	G	E	I	A	A	D	F	A	Q	D
Query Conservation
Alig confidence																		.	.										.
Template Conservation																		.	.										.
Template Sequence		A	L	P	G	G	R	P	D	A	P	P	Q	A	E	E	L	.	.	A	P	G	L	H	L	L	L	G	.	G	P	L	A	D	T	L	G	L	A	A	A	H	E	L	A	Q	R	V	S	A
Template Known Secondary structure				G	G	G		T	T									.	.		T	T							.		T	T
Template Predicted Secondary structure																		.	.										.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions