Phyre 2 alignment of P40874 with c3allA

Job Description P40874
Confidence 99.28% Date Thu Jan 5 12:01:17 GMT 2012

Rank 52 Aligned Residues 296

% Identity 13% Template c3allA_

PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase; PDBTitle: crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid2 oxygenase, mutant y270a

Resolution 1.78 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence	Y	D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	.	.	L	S	R	H	N	E	E
Query Conservation																																																																								.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	R	R	A	E	V	A	G	G	G	F	A	G	L	T	A	A	I	A	L	K	Q	N	G	W	D	V	R	L	H	E	K	S	S	E	L	R	A	F	G	A	G	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	H	N	G	L	R	V	L	E	G	L	G	A	L	D	D	V	L	Q
Template Known Secondary structure									S													T	T								S	S	S	S					S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T							T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T	W	I	Q	L	A	K
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	G	S	H	T	P	P	T	Y	E	T	W	M	H	N	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	K	E	T	F	N	G	L	P	W	R	I	M	T	R	S	H	L	H	D	A	L	V	N	R	A	R
Template Known Secondary structure	T		B			S							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90																																					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.
Query Sequence	E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	G	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	L	P	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	.	.	.	.	.	.	.	.	.	Y	S	V
Query Conservation																																																																					.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																																															.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence	A	L	G	V	D	I	S	V	N	S	E	A	V	A	A	D	P	V	G	.	.	.	R	L	T	L	Q	T	G	E	V	L	E	A	D	L	I	V	G	A	D	G	V	G	S	K	V	R	D	S	I	G	F	K	Q	D	R	W	V	S	K	D	G	L	I	R	L	I	V	P	R	M	K	K	E	L	G	H	G	E
Template Known Secondary structure		T	T					S	S								T	T	T	.	.	.					T	T	S						S								T	T																																		S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
	119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

	232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence	K	N	K	F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	F	P	F	L	R	N	V	L	P	G	I	G	C	C	L	Y	G	A	A	C	T	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence	W	D	N	T	I	D	M	W	N	F	W	P	R	V	Q	R	I	L	Y	S	P	C	N	E	N	E	L	Y	L	G	L	M	A	P	A	A	D	P	R	G	S	S	V	P	I	D	L	E	V	W	V	E	M	F	P	F	L	E	P	C	L	I	E	A	A	K	L	K	T	A	R	Y	D	K	A	E	T	T	K	L
Template Known Secondary structure	T	T	S								S	S	S										S	S	S										T	T		T	T	T	T		S	S											G	G	G									T		S	S
Template Predicted Secondary structure
Template SS confidence
	196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

	312	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence	N	S	P	.	.	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V	L	G	E	I	A	A	D	F	A	Q	D	K	K	S
Query Conservation				.	.
Alig confidence				.	.										.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence	D	S	W	T	R	G	K	V	A	L	V	G	D	A	.	.	.	.	.	A	H	A	M	C	P	A	L	A	Q	G	A	G	C	A	M	V	N	A	F	S	L	S	Q	D	L	E	E	G	S	S
Template Known Secondary structure	S		S			T	T					T			.	.	.	.	.						S	T	T	S																	T	T	S	S	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
	276	.	.	.	280	.	.	.	.	.	.	.	.	.						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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