Job Description P40874 Confidence 100.00% Date Thu Jan 5 12:01:17 GMT 2012 Rank 11 Aligned Residues 356 % Identity 18% Template c1ryiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycine oxidase; PDBTitle: structure of glycine oxidase with bound inhibitor glycolate Resolution 1.80 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	K	.	.	Y	D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	L	S	R	H	N
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		M	K	R	H	Y	E	A	V	V	I	G	G	G	I	I	G	S	A	I	A	Y	Y	L	A	K	E	N	K	N	T	A	L	F	E	S	G	T	M	G	G	R	T	T	S	A	A	A	G	M	L	G	A	H	A	E	C	E	E	R	D	A	F	F	D	F	A	M	H	S	Q	R	L	Y	K	G	L	G	E	E	L
Template Known Secondary structure				S										S													T	T								S	S	S	T	T	T	T								B			G	G	G			S	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	E	D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																					.	.	.																														.
Template Conservation																										.	.	.																														.
Template Sequence		Y	A	L	S	G	V	D	I	R	Q	H	N	G	G	M	F	K	L	A	F	S	E	E	D	.	.	.	V	L	Q	L	R	Q	M	D	D	L	D	S	V	S	W	Y	S	K	E	E	V	L	E	K	E	P	Y	A	S	.	G	D	I	F	G	A	S	F	I	Q	D	D	V	H	V	E	P	Y	F	V	C	K	A
Template Known Secondary structure												B									S	S				.	.	.						T	T	T	T	S	T	T														T	T	S		.	T	T								T	T			B
Template Predicted Secondary structure																										.	.	.																														.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	Q	L	A	K	E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	G	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	L	P	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	V	K	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	K	A	A	K	M	L	G	A	E	I	F	E	H	T	P	V	L	H	V	E	R	D	G	E	A	L	F	I	K	T	P	S	G	D	V	W	A	N	H	V	V	V	A	S	G	V	W	S	G	M	F	F	K	Q	L	G	L	N	N	A	F	L	P	V	K	G	E	C	L	S	V	W	N	D	D	I	P	L
Template Known Secondary structure									T	T					T	T									S	S	S	S						T	T													G	G	G	T							T	T																			S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	F	P	F	L	R	N	V	L	P	G	I	G	C	C	L	Y	G	A	A	C	T	Y	D	N	S	P
Query Conservation
Alig confidence							.	.	.	.	.																																																				.	.	.	.	.
Template Conservation							.	.	.	.	.																																																				.	.	.	.	.
Template Sequence		T	K	T	L	Y	.	.	.	.	.	H	D	H	C	Y	I	V	P	R	K	S	G	R	L	V	V	G	A	T	M	K	P	G	D	W	S	E	T	P	D	L	G	G	L	E	S	V	M	K	K	A	K	T	M	L	P	A	I	Q	N	M	.	.	.	.	.	K	V	D	R	F	W	A	G	L	R	P	G	T	K
Template Known Secondary structure			S				.	.	.	.	.		T	T							T	T	S											T					S																		G	G	G	G	G	S	.	.	.	.	.														T
Template Predicted Secondary structure							.	.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		237	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V	L	G	E	I	A	A	D	F	A	Q	D	K	K	S	D	F	D	.	L	T	P	F	R	L	S	R
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		D	G	K	P	Y	I	G	R	H	P	E	D	S	R	I	L	F	A	A	G	H	F	R	N	G	I	L	L	A	P	A	T	G	A	L	I	S	D	L	I	M	N	K	E	V	N	Q	D	W	L	H	A	F	R	I	D	R
Template Known Secondary structure		T	S								T	T											S	S		T	T	T	T													T	T											T		S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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