Job Description P40874 Confidence 100.00% Date Thu Jan 5 12:01:17 GMT 2012 Rank 3 Aligned Residues 365 % Identity 15% Template c1pj6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid Resolution 1.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	.	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	L	S	R	H	N	E	E	D	P
Query Conservation																										.
Alig confidence																										.																										.
Template Conservation																																																				.
Template Sequence		R	I	V	I	I	G	A	G	I	V	G	T	N	L	A	D	E	L	V	T	R	G	W	N	N	I	T	V	L	D	Q	G	P	L	N	M	P	G	G	S	T	S	H	A	P	G	L	V	F	Q	.	T	N	P	S	K	T	M	A	S	F	A	K	Y	T	V	E	K	L	L	S	L	T	E	D	G	V	S	C	F
Template Known Secondary structure									S													T	T									S	S		T	T				S	G	G	G	G								.			S																					T	T			S
Template Predicted Secondary structure																																																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T	W	I	Q	L	A	K	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	V	G	G	L	E	V	A	T	T	E	T	R	L	A	D	L	K	R	K	L	G	Y	A	A	A	W	G	I	E	G	R	L	L	S	P	A	E	C	Q	E	L	Y	P	L	L	D	G	E	N	I	L	G	G	L	H	V	P	S	D	G	L	A	S	A	A	R	A	V	Q	L	L	I	K	R	T	E	S	A
Template Known Secondary structure											S	S																		T																T	T	S		G	G	G								T	T																				T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.
Predicted Secondary structure																					.																													.	.	.	.																						.	.	.
Query SS confidence																					.																													.	.	.	.																						.	.	.
Query Sequence		G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	G	.	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	.	.	.	.	E	L	P	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	.	.	.	V	K	N	K
Query Conservation																					.																													.	.	.	.																						.	.	.
Alig confidence																					.																													.	.	.	.																						.	.	.
Template Conservation
Template Sequence		G	V	T	Y	R	G	S	T	T	V	T	G	I	E	Q	S	G	G	R	V	T	G	V	Q	T	A	D	G	V	I	P	A	D	I	V	V	S	C	A	G	F	W	G	A	K	I	G	A	M	I	G	M	A	V	P	L	L	P	L	A	H	Q	Y	V	K	T	T	P	V	P	A	Q	Q	G	R	N	D	Q	P	N
Template Known Secondary structure		T						S										T	T								T	T						S							G	G	G							T	T	T																S			G	G	G	T	T	T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.														270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	F	P	F	L	R	N	V	L	P	G	I	G	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		G	A	R	L	P	I	L	R	H	Q	D	Q	D	L	Y	Y	R	E	H	G	D	R	Y	G	I	G	S	Y	A	H	R	P	M	P	V	D	V	D	T	L	G	A	Y	A	P	E	T	V	S	E	H	H	M	P	S	R	L	D	F	T	L	E	D	F	L	P	A	W	E	A	T	K	Q	L	L	P	A	L	A	D
Template Known Secondary structure					S						G	G	G	T							T	T									S				B			G	G	G	S					G	G	G		B	T	T	B	S	T	T																					G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
			301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	C	C	L	Y	G	A	A	C	T	Y	D	N	S	P	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V	L	G	E	I	A	A	D	F	A	Q	D	K	K	S	D	F	D	L	T	P	F	R	L	S	R	F	Q
Query Conservation		.
Alig confidence		.																																				.	.	.
Template Conservation																																						.	.	.
Template Sequence		S	E	I	E	D	G	F	N	G	I	F	S	F	T	P	D	G	G	P	L	L	G	E	S	K	E	L	D	G	F	Y	V	A	E	A	V	.	.	.	W	V	T	H	S	A	G	V	A	K	A	M	A	E	L	L	T	T	G	R	S	E	T	D	L	G	E	C	D	I	T	R	F	E
Template Known Secondary structure		S														T	T	S								S	S	S	B	T						S		.	.	.		G	G	G															S	S		S	S			T	T	T	B	G	G	G	S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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