Job Description P40874 Confidence 99.97% Date Thu Jan 5 12:01:17 GMT 2012 Rank 17 Aligned Residues 324 % Identity 11% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure				.	.																																													.	.
Query SS confidence				.	.																																													.	.
Query Sequence		M	K	.	.	Y	D	L	I	I	I	G	S	G	S	V	G	A	A	A	G	Y	Y	A	T	R	A	G	L	N	V	L	M	T	D	A	H	M	P	P	H	Q	H	G	S	H	H	G	D	.	.	T	R	L	I	R	H	A	Y	G	E	G	E	K	Y	V	P	L	V	L	R	A	Q	T	L	W	D	E	L	S	R
Query Conservation				.	.																																													.	.
Alig confidence				.	.																																													.	.
Template Conservation
Template Sequence		M	H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	V	E
Template Known Secondary structure					S									S													T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	E	E	D	P	I	F	V	R	S	G	V	I	N	L	G	P	A	D	S	T	F	L	A	N	V	A	H	S	A	E	Q	W	Q	L	N	V	E	K	L	D	A	Q	G	I	M	A	R	W	P	E	I	R	V	P	D	N	Y	I	G	L	F	E	T	D	S	G	F	L	R	S	E	L	A	I	K	T	W	I
Query Conservation
Alig confidence																								.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	.	.	.	L	L	G	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	.	.	.	.	.	.	.	.	.	.	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A
Template Known Secondary structure			T	T	T	T	S	S											S	S	G	G	G	.	.	.	G	G	G	G	T	T	T	T	T	S	T	T						G	G	G	S		.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																								.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.				.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.											.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		Q	L	A	K	E	A	G	C	A	Q	L	F	N	C	P	V	T	A	I	R	H	D	D	D	G	V	T	I	E	T	A	D	G	E	Y	Q	A	K	K	A	I	V	C	A	G	T	W	V	K	D	L	L	P	E	.	.	L	P	V	Q	P	V	R	K	V	F	A	W	Y	Q	A	D	G	R	Y	S	V	K	N	K
Query Conservation																																																								.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																										.	.																					.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.
Template Sequence		R	E	L	Q	K	L	G	A	T	F	E	R	R	T	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	I	A	G	I	D	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	S	P	C	K	R	C	.	.	.	.
Template Known Secondary structure							T	T									S	B	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T		S	S		S							G	G	G	G	G	T	S	B	T	T			T	T																			.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																																																.	.	.	.
Template SS confidence
		1148	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.													.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300		.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																				.											.	.	.
Query SS confidence																																																																				.											.	.	.
Query Sequence		F	P	A	F	T	G	E	L	P	N	G	D	Q	Y	Y	G	F	P	A	E	N	D	A	L	K	I	G	K	H	N	G	G	Q	V	I	H	S	A	D	E	R	V	P	F	A	E	V	A	S	D	G	S	E	A	F	P	F	L	R	N	V	L	P	G	I	G	.	C	C	L	Y	G	A	A	C	T	Y	.	.	.
Query Conservation																																																																				.											.	.	.
Alig confidence		.	.	.																																																																.											.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	M	D	S	S	D	P	A	S	P	A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R	H	N	V	G	L	R	P	A	R
Template Known Secondary structure		.	.	.					S		T	T									T	T	T											T					S																		G	G	G	S	S	S	S	S	G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					1212	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
																						311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	S	P	D	E	D	F	I	I	D	T	L	P	G	H	D	N	T	L	L	I	T	G	L	S	G	H	G	F	K	F	A	S	V	L	G	E	I	A	A	D	F	A	Q	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	G	P	R	V	E	A	E	R	I	V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E
Template Known Secondary structure		T	T	S											S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1289	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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