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Job DescriptionP0ABJ9
Confidence40.02%DateThu Jan 5 11:15:40 GMT 2012
Rank9Aligned Residues230
% Identity19%Templated1xmea1
SCOP infoCytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG. . . . . . . . . KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTN
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Template Sequence  WKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDY
Template Known Secondary structure  TT

STTS
TT
TSGGG
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   294.....300.........310.........320.........330.........340.........350.........360.........370...
 
   81........90.........100.........110.........120... ......130.........140.........150........
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Query Sequence  WSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK. . VQHMCVTWLVALGSNLSALWILVANGWMQNPIASD
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Template Sequence  VVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAG. LLNVPRR. .
Template Known Secondary structure  TTBTTTTT




.TT
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   374.....380.........390.........400.........410.........420.........430.........440... ......450
 
   159160.........170.........180.........190.........200.........210. ......
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Query Sequence  FNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGR. . . . . . . . . . . . . . . . . . . . . DFAFAK
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Template Sequence  . . . . . . . . AYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGLFSVLLSRERKPELAEAPLPFAEVISGPEDRRLVL
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GGGSGGG
GGGT




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   451........460.........470.........480.........490.........500.........510.........520..
 
   218.220.........230.........240.........250
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Query Sequence  RSFAIAASFGMAAVLSVIVLGDESGYEMGDVQK
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Template Conservation                     
             
Template Sequence  AMDRIGFWFAVAAILVVLAYGPTLVQLFGHLNP
Template Known Secondary structure  T
S


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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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