Job Description P0ABJ9 Confidence 2.80% Date Thu Jan 5 11:15:40 GMT 2012 Rank 92 Aligned Residues 56 % Identity 9% Template c3ddlB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:xanthorhodopsin; PDBTitle: crystallographic structure of xanthorhodopsin, a light-2 driven ion pump with dual chromophore Resolution 1.90 Å

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		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.				.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.											.	.	.	450	.
Predicted Secondary structure																																			.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	F	L	L	L	A	I	I	A	L	S	F	W	S	V	I	R	N	R	I	G	E	K	K	W	L	L	R	A	A	L	Y	.	.	.	G	I	P	L	P	W	I	A	V	E	A	G	W	F	V	A	E	Y	.	.	.	.	.	.	.	.	.	.	G	R	Q	P	W
Query Conservation																																			.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	T	V	A	T	M	T	A	S	F	V	F	F	V	L	A	R	N	N	V	A	P	K	Y	R	I	S	M	M	V	S	A	L	V	V	F	I	A	G	Y	H	Y	F	R	I	T	S	S	W	E	A	A	Y	A	L	Q	N	G	M	Y	Q	P	T	G	E	L	F	N	D
Template Known Secondary structure																		G	G	G	S		G	G	G																												T					S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions