Job Description P0ABJ9 Confidence 77.97% Date Thu Jan 5 11:15:40 GMT 2012 Rank 4 Aligned Residues 177 % Identity 15% Template c1m56G_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:cytochrome c oxidase; PDBTitle: structure of cytochrome c oxidase from rhodobactor2 sphaeroides (wild type) Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	F	V	P	L	T	L	G	M	A	F	L	L	A	I	M	E	T	V	Y	V	L	S	G	K	Q	I	Y	K	D	M	T	K	F	W	G	K	L	F	G	I	N	F	A	L	G	V	A	T	G	L	T	M	E	F	Q	F	G	T	N	W	S	Y	Y	S	H	Y	V	G	D	I	F	G	A	P	L	A	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	M	A	T	M	V	I	A	V	P	T	G	I	K	I	F	S	W	I	A	T	M	W	G	G	S	I	E	L	K	T	P	M	L	W	A	L	G	F	L	F	L	F	T	V	G	G	V	T	G	I	V	L	S	Q	A	S	V	D	R	Y	Y	H	D	T	Y	Y	V	V	A	H	F	H	Y	V	M	S	L	G
Template Known Secondary structure									T																T	T	S																														S								T	T	B													T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	M	A	F	F	L	E	S	T	F	V	G	L	F	F	F	G	W	D	R	L	G	K	V	Q	H	M	C	V	T	W	L	V	A	L	G	S	N	L	S	A	L	W	I	L	V	A	N	G	W	M	Q	N	P	I	A	S	D	F	N	F	E	T	M	R	M	E	M	V	S	F	S	E	L	V	L	N	P	V
Query Conservation
Alig confidence																				.																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	F	G	I	F	A	G	I	Y	F	W	I	G	K	M	S	G	.	R	Q	Y	P	E	W	A	G	K	L	H	F	W	M	M	F	V	G	A	N	.	L	T	F	F	P	Q	H	F	L	G	R	Q	G	M	P	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	D	Y	P	E	A	F
Template Known Secondary structure																			S	.																					.				S								T	T		B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			S	T	T
Template Predicted Secondary structure																				.																					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.																.	.	.	.	.	.	.	490
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	K	F	V	H	T	V	A	S	G	Y	V	T	G	A	M	F	I	L	G	I	S	A	W	Y	M	L	K	G	R	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	W	N	F	V	S	S	L	G	A	F	L	S	F	A	S	F	L	F	F	L	G	V	I	F	Y	T	L	T	R	G	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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