Job Description P0ABJ9 Confidence 87.95% Date Thu Jan 5 11:15:40 GMT 2012 Rank 3 Aligned Residues 176 % Identity 15% Template c1fftF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:ubiquinol oxidase; PDBTitle: the structure of ubiquinol oxidase from escherichia coli Resolution 3.50 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	P	L	T	L	G	M	A	F	L	L	A	I	M	E	T	V	Y	V	L	S	G	K	Q	I	Y	K	D	M	T	K	F	W	G	K	L	F	G	I	N	F	A	L	G	V	A	T	G	L	T	M	E	F	Q	F	G	T	N	W	S	Y	Y	S	H	Y	V	G	D	I	F	G	A	P	L	A	I	E	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	T	M	I	I	A	I	P	T	G	V	K	I	F	N	W	L	F	T	M	Y	Q	G	R	I	V	F	H	S	A	M	L	W	T	I	G	F	I	V	T	F	S	V	G	G	M	T	G	V	L	L	A	V	P	G	A	D	F	V	L	H	N	S	L	F	L	I	A	H	F	H	N	V	I	I	G	G	V	V
Template Known Secondary structure							T	T													T	T	T	T						S																								T	S						T	T	T	T	B													T	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	F	F	L	E	S	T	F	V	G	L	F	F	F	G	W	D	R	L	G	K	V	Q	H	M	C	V	T	W	L	V	A	L	G	S	N	L	S	A	L	W	I	L	V	A	N	G	W	M	Q	N	P	I	A	S	D	F	N	F	E	T	M	R	M	E	M	V	S	F	S	E	L	V	L	N	P	V	A	Q
Query Conservation
Alig confidence																			.																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	C	F	A	G	M	T	Y	W	W	P	K	A	F	G	F	.	K	L	N	E	T	W	G	K	R	A	F	W	F	W	I	I	G	F	F	V	A	.	F	M	P	L	Y	A	L	G	F	M	G	M	T	R	R	L	S	Q	Q	I	D	P	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T
Template Known Secondary structure												S					S	S	.																						.										T	T		B	T	T		S					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																						.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.															.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	F	V	H	T	V	A	S	G	Y	V	T	G	A	M	F	I	L	G	I	S	A	W	Y	M	L	K	G	R	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	M	I	A	A	S	G	A	V	L	I	A	L	G	I	L	C	L	V	I	Q	M	Y	V	S	I	R	D	R	D	Q
Template Known Secondary structure																													S	S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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