|   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | |
|
|
. | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | F | G | C | E | Q | G | V | D | F | V | A | A | S | F | I | R | K | R | S | D | V | I | E | I | R | E | H | L | K | A | H | G | G | E | N | I | H | I | I | S | K | I | E | N | Q | E | G | L | N | N | F | D | E | I | L | E | A | S | D | G | I | M | V | . |
. |
. |
A | R | G | D | L | G | V | E | I | P | V | E |
Query Conservation |   |
|   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | E | P | L | A | K | A | G | A | S | G | F | T | F | H | I | E | V | S | R | D | N | W | Q | E | L | I | Q | S | I | K | A | K | G | M | R | P | G | V | S | L | R | P | G | T | P | V | E | E | V | F | P | L | V | E | A | E | N | P | V | E | L | V | L | V | M | T | V | E | P | G | F | G | G | Q | K | F | M | P | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
| S |  |  |  |  |  | G | G | G |
| T | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | S |
| G | G | G | G |  |  |  |  |  | S | S | S |
|
| S |  |  |  |  |  | S | S |
| T | T |
| S | S |
|
|
|
| G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | I | F | A | Q | K | M | M | I | E | K | C | I | R | A | R | K | V | V | I | T | A | T | Q | M | L | D | S | M | I | K | N | P | R | P | T | R | A | E | A | G | D | V | A | N | A | I | L | D | G | T | D | A | V | M | L | S | G | E | S | A | K | G | K | Y | P | L | E | A | V | S | I | M | A | T | I | C | E | R |
Query Conservation |   |
  |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |
|
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
M | M | E | K | V | R | A | . |
. |
. |
. |
L | R | K | K | Y | P | S | L | D | I | E | V | D | G | G | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | S | T | I | D | V | A | A | S | A | G | A | N | C | I | V | A | G | S | S | I | F | G | A | A | E | P | G | E | V | I | S | A | L | R | K | S | V | E | G |
Template Known Secondary structure |   |
G |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
| T | T | S |  |  |  |  |  | S | S |
| S | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  | S |  |  |  |  | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | |
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
  |
  |   |
335 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
T |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
S |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
223 |
  |