Job Description P0AD61 Confidence 53.47% Date Thu Jan 5 11:20:06 GMT 2012 Rank 152 Aligned Residues 200 % Identity 17% Template c3sz8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190													.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence																			.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		C	K	V	L	N	N	G	D	L	G	E	N	K	G	V	N	L	.	.	.	P	G	V	S	I	A	L	P	A	L	A	E	K	D	K	Q	D	L	I	F	G	C	E	Q	G	V	D	F	V	A	.	.	.	.	.	.	.	.	.	.	.	.	A	S	F	I	R	K	R	.	.	S	D	V	I	E	I	R	E	H
Query Conservation																			.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence																			.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		V	A	I	S	P	G	V	T	A	G	N	S	L	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	V	G	L	D	E	G	L	K	I	F	A	E	V
Template Known Secondary structure						T	T					T	T	S																																T									S			T	T		S	S	T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	H	G	G	E	N	I	H	I	I	S	K	I	E	N	Q	E	G	L	N	N	F	D	E	I	L	E	A	S	D	G	I	M	V	A	R	G	D	L	G	V	E	I	P	V	E	E	V	I	F	A	Q	K	M	M	I	E	K	C	I	R	A	R	K	V	V	I	T	A	T	Q	M	L	D	S	M	I	K
Query Conservation
Alig confidence						.	.	.																					.	.	.											.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.																					.	.	.											.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		K	A	R	F	.	.	.	G	V	P	V	I	T	D	V	H	E	A	E	Q	A	A	P	V	A	E	I	.	.	.	A	D	V	L	Q	V	P	A	F	L	.	.	.	.	.	.	.	.	.	.	.	A	R	Q	T	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	.	.	.	.	.	.	.	.	.	K
Template Known Secondary structure						.	.	.										S	G	G	G								.	.	.		S						G	G	G	.	.	.	.	.	.	.	.	.	.	.	T	T											T		S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.																					.	.	.											.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.												.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.
		287	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure					.																.
Query SS confidence					.																.
Query Sequence		N	P	R	.	P	T	R	A	E	A	G	D	V	A	N	A	I	L	D	.	G	T	D	A	V	M	L	S	G	E	S	A	K	G	K	Y	P	L	E	A	V	S	I	M	A	T	I	C	E	R	T	D	R	V	M	N	S	R	L	E	F	N	N	D	N	R	K	L	R	I	T	E	A	V	C	R	G	A	V	E
Query Conservation					.																.
Alig confidence					.																.																							.																										.	.	.	.	.	.
Template Conservation																																												.																										.	.	.	.	.	.
Template Sequence		K	P	Q	F	M	S	P	T	Q	L	K	H	V	V	S	K	C	G	E	V	G	N	D	R	V	M	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	.	M	L	G	F	R	Q	M	A	E	T	T	G	G	C	P	V	I	F	D	V	T	H	S	L	Q	.	.	.	.	.	.	V	L	D	L	A	R
Template Known Secondary structure				T	T	S		T	T	S											T	T														S	S	S						.	T	T								T	T	T	S							T	T	T	T			.	.	.	.	.	.
Template Predicted Secondary structure																																												.																										.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	E	K	L	D	A	P	L	I	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	I	A	V	G	I	A	G	L	F	L
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions