Job Description P0AD61 Confidence 21.15% Date Thu Jan 5 11:20:06 GMT 2012 Rank 392 Aligned Residues 159 % Identity 14% Template c3kx2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna PDBTitle: crystal structure of prp43p in complex with adp Resolution 2.20 Å

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		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	N	P	R	P	T	R	A	E	A	G	D	V	A	N	A	I	L	D	G	T	D	A	V	M	L	S	G	E	S	A	K	G	K	Y	P	L	E	A	V	S	I	M	A	T	I	C	E	R	T	D	R	V	M	N	S	R	L	E	F	N	N	D	N	R	K	L	R	I	T	E	A	V	C	R	G	A	V	E
Query Conservation
Alig confidence																								.														.	.	.	.	.																											.	.	.
Template Conservation																								.														.	.	.	.	.																											.	.	.
Template Sequence		I	R	R	E	L	P	V	H	A	Q	R	D	E	F	L	K	L	Y	Q	N	N	Q	.	I	M	V	F	V	G	E	T	G	S	G	K	T	.	.	.	.	.	T	Q	I	P	Q	F	V	L	F	D	E	M	P	H	L	E	N	T	Q	V	A	C	T	Q	P	R	.	.	.	R	V	A	A	M	S	V	A	Q	R
Template Known Secondary structure				T	T	S	G	G	G	G	G												S	.								T	T	S	S			.	.	.	.	.													G	G	G	G	T								S		.	.	.
Template Predicted Secondary structure																								.														.	.	.	.	.																											.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		T	A	E	K	L	D	A	P	L	I	V	V	A	T	Q	G	G	K	S	A	R	A	V	R	K	Y	F	P	D	A	T	I	L	A	L	T	T	N	E	K	T	A	H	Q	L	V	L	.	.	.	S	K	G	V	V	P	Q	L	V	K	E	I	T	S	T	D	D	F	Y	R	L	G	K	E	L	A	L	Q	S	G
Query Conservation																																																	.	.	.
Alig confidence										.	.	.																												.									.	.	.
Template Conservation										.	.	.																												.
Template Sequence		V	A	E	E	M	D	V	K	.	.	.	L	G	E	E	V	G	Y	S	I	R	F	E	N	K	T	S	N	K	T	I	L	K	Y	M	T	D	G	.	M	L	L	R	E	A	M	E	D	H	D	L	S	R	Y	S	C	I	I	L	D	E	A	H	E	R	T	L	A	T	D	I	L	M	G	L	L	K	Q	V	V
Template Known Secondary structure						T	T			.	.	.	B	T	T	T						T	T						T	T										.										T	T		T	T									G	G	G
Template Predicted Secondary structure										.	.	.																												.
Template SS confidence
		160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	H	K	G	D	V	V	V	M	V	S	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	R	P	D	L	K	I	I	I	M	S	A	T	L
Template Known Secondary structure					T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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