Job Description P0AD61 Confidence 49.71% Date Thu Jan 5 11:20:06 GMT 2012 Rank 162 Aligned Residues 193 % Identity 14% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																									.																														.
Query SS confidence																																									.																														.
Query Sequence		N	K	G	V	N	L	P	G	V	S	I	A	L	P	A	L	A	E	K	D	K	Q	D	L	I	F	G	C	E	Q	G	V	D	F	V	A	A	S	F	.	I	R	K	R	S	D	V	I	E	I	R	E	H	L	K	A	H	G	G	E	N	I	H	I	I	S	K	I	E	.	N	Q	E	G	L	N	N	F	D	E
Query Conservation																																									.																														.
Alig confidence														.	.	.	.																								.																	.	.												.
Template Conservation														.	.	.	.																																									.	.
Template Sequence		R	E	G	E	Q	F	A	N	A	F	F	D	.	.	.	.	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	.	.	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E
Template Known Secondary structure		T	G	G	G	G	S	T	T					.	.	.	.															T		S							G	G	G													T	S	.	.			S	S								S
Template Predicted Secondary structure														.	.	.	.																																									.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.					.	.
Predicted Secondary structure													.	.	.	.																																																												.	.	.	.
Query SS confidence													.	.	.	.																																																												.	.	.	.
Query Sequence		I	L	E	A	S	D	G	I	M	V	A	.	.	.	.	R	G	D	L	G	V	E	I	P	V	E	E	V	I	F	A	Q	K	M	M	I	E	K	C	I	R	A	R	K	V	V	I	T	A	T	Q	M	L	D	S	M	I	K	N	P	R	P	T	R	A	E	A	G	D	V	A	N	A	I	.	.	.	.	L	D
Query Conservation													.	.	.	.																																																												.	.	.	.
Alig confidence		.	.										.	.	.	.																																		.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation		.	.																																															.	.	.	.	.	.	.	.	.
Template Sequence		.	.	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	.	.	.	.	.	.	.	.	.	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I
Template Known Secondary structure		.	.	T	T		S								G	G	G																										T	T						.	.	.	.	.	.	.	.	.			T	T	G	G	G	S
Template Predicted Secondary structure		.	.																																															.	.	.	.	.	.	.	.	.
Template SS confidence
				117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.										.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	D	A	V	M	L	S	G	E	S	A	K	G	K	Y	P	L	E	A	V	S	I	M	A	T	I	C	E	R	T	D	R	V	M	N	S	R	L	E	F	N	N	D	N	R	K	L	R	I	T	E	A	V	C	R	G	A	V	E	T	A	E	K	L	D	A	P	L	I
Query Conservation
Alig confidence										.																																					.	.	.	.	.	.	.	.	.
Template Conservation										.																																					.	.	.	.	.	.	.	.	.
Template Sequence		G	V	N	R	V	G	I	A	.	D	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	.	.	.	.	.	.	.	.	.	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure				S						.		S	S	S																			S	S							B		T	T	S		.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure										.																																					.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.										.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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