Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD61
Confidence26.97%DateThu Jan 5 11:20:06 GMT 2012
Rank312Aligned Residues129
% Identity19%Templatec3iauA_
PDB info PDB header:lyaseChain: A: PDB Molecule:threonine deaminase; PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320.........330.........340..
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  MIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSR
Query Conservation 

  
   




 







   
 





 





 

 
 



 


 
 


  
  
  
   

      
Alig confidence 














...........





















......

















......

Template Conservation   
 

   
    

........... 
          
   

 
  ......       
   
   
  ......  
Template Sequence  VALAGQRLNCVAKIV. . . . . . . . . . . MPTTTPQIKIDAVRALGGDVVL. . . . . . YGKTFDEAQTHALELSEK. . . . . . DG
Template Known Secondary structure  TT

...........
TT

TT
......

SS......T
Template Predicted Secondary structure 


...........







......



......

Template SS confidence 















































































   123......130....... ..140.........150......... 160.........170....... ..
 
   343......350.........360......... 370.........380.........390 .........400.........410....
Predicted Secondary structure 











.







....








Query SS confidence 


























.




















. . . .























Query Sequence  LEFNNDNRKLRITEAVCRGAVETAEKL. DAPLIVVATQGGKSARAVRKY. . . . FPDATILALTTNEKTAHQLVLSKG
Query Conservation                 

  
   
  
. 
 


  
 

 

  

  ....

  



 
      
 
 
  
Alig confidence 


























.




















....























Template Conservation                
  
 
 

  
    
 

   
 

  


    
       





        
   
Template Sequence  LKYIPPFDDPGVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGAASMTLSLHEG
Template Known Secondary structure 


SSSS

S
SSSSTTSGGG
T
Template Predicted Secondary structure 


























Template SS confidence 












































































   180.........190.........200.........210.........220.........230.........240.........250......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions