|   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | |
|
. | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | F | D | E | I | L | E | A | S | D | G | I | M | V | A | R | G | D | L | G | V | E | I | P | V | E | E | V | I | F | A | Q | K | M | M | I | E | K | C | . |
. |
I | R | A | R | K | V | V | I | T | A | T | Q | M | L | D | S | M | I | K | N | P | R | P | T | R | A | E | A | G | D | V | A | N | A | I | L | D | G |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |
|
|   |   |
| . | . |   |   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |
|
|
|   |
|
|
|   |
|
Template Sequence |   |
I | N | I | A | P | L | F | E | H | A | D | V | L | M | C | T | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | L | R | S | V | V | P | P | A | T | N | R | P | V | V | L | R | A | S | G | A | N | S | I | L | A | E | L | S | N | E | A | V | . |
A | L | S | M | D | D | A | V | R | L | N |
Template Known Secondary structure |   |
 |  | T | G | G | G | G | G | G |
| S |  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  | S |
| G | G | G |
|
|
|  |  |  |  |
|  |  | S |
|
| T | T | S |
| T | T |
|
|  |  | . |
| S |
|  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . |
  |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | D | A | V | M | L | S | G | E | S | A | K | G | K | Y | P | L | E | A | V | S | I | M | A | T | I | C | E | R | T | D | R | V | M | N | S | R | L | E | F | N | N | D | N | R | K | L | R | I | T | E | A | V | C | R | G | A | V | E | T | A | E | K | L | D | A | P | L | I | V | V | A | T | Q | G | G | K | S | A | R |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|
|
|   |
|   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |   |   |
| . |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |
| . | . | . | . |   |
|   |
|   |   |
|
|
|
|
|   |
|
|
|
|
| . |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | C | A | V | A | A | Q | V | Y | I | G | . |
S | E | Y | E | H | Q | S | I | K | N | I | I | Q | L | V | D | A | G | M | K | V | G | M | P | T | M | A | V | T | G | V | V | R | D | . |
. |
. |
. |
Q | R | Y | F | S | L | A | T | R | I | A | A | E | M | G | A | Q | . |
I | I | K | T | Y | Y | V | E | K | G | F | E |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |
| T | T | . | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | . |  |  |  |  |
|
|
| T | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | |
. | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
|
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
. | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | K | Y | F | P | D | A | T | I | L | A |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   | . |   |
|
|
|
|
Template Sequence |   |
R | I | V | A | G | C | P | . |
V | P | I | V | I |
Template Known Secondary structure |   |
 |  |  |  | T |
| S | . | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
213 | . | . | . | . | . | . | |
220 | . | . | . | . |
  |