Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD61
Confidence21.93%DateThu Jan 5 11:20:06 GMT 2012
Rank380Aligned Residues51
% Identity16%Templatec3d0fA_
PDB info PDB header:transferaseChain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca; PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100.........110.........120..... ....130...
Predicted Secondary structure 

















...

Query SS confidence 











































. . .







Query Sequence  DVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLV. . . DDGLIGME
Query Conservation   
 
  
  
 
            
 
    
   
  

 
 
...


 
 
 
Alig confidence 














.



























...







Template Conservation   
    
    
   . 
 


         
   
  



 
       
 
 
Template Sequence  EAFRKNGETIRITGD. GLKAAHRFLSNDPKIGEKRIRPGALIRVKKTEKGSWQIV
Template Known Secondary structure  TTS

GG.GGSTTGGGTTT
TTTGGGS

TT

TTS
Template Predicted Secondary structure 


.
















Template SS confidence 






















































   364.....370........ .380.........390.........400.........410.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions