 |
Job Description | P0AD61 | Confidence | 21.93% | Date | Thu Jan 5 11:20:06 GMT 2012 |
Rank | 380 | Aligned Residues | 51 |
% Identity | 16% | Template | c3d0fA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:penicillin-binding 1 transmembrane protein mrca; |
PDBTitle: structure of the big_1156.2 domain of putative penicillin-binding2 protein mrca from nitrosomonas europaea atcc 19718
|
Resolution | 1.64 Å |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
. | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | S | L | K | A | G | Q | T | F | T | F | T | T | D | K | S | V | I | G | N | S | E | M | V | A | V | T | Y | E | G | F | T | T | D | L | S | V | G | N | T | V | L | V | . |
. |
. |
D | D | G | L | I | G | M | E |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
| . | . | . |
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |
|   |   |   | . |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
Template Sequence |   |
E | A | F | R | K | N | G | E | T | I | R | I | T | G | D | . |
G | L | K | A | A | H | R | F | L | S | N | D | P | K | I | G | E | K | R | I | R | P | G | A | L | I | R | V | K | K | T | E | K | G | S | W | Q | I | V |
Template Known Secondary structure |   |
 |  |  |  | T | T | S |
|  |  |  |  |
| G | G | . | G | G | S | T | T | G | G | G | T | T | T |
| T | T | T | G | G | G | S |
|
| T | T |
|  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
364 | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
. | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|