Job Description P0AD61 Confidence 57.82% Date Thu Jan 5 11:20:06 GMT 2012 Rank 142 Aligned Residues 200 % Identity 11% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.		.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																					.			.										.																	.	.	.	.
Query SS confidence																					.			.										.																	.	.	.	.
Query Sequence		G	V	S	I	A	L	P	A	L	A	E	K	D	K	Q	D	L	I	F	.	G	C	.	E	Q	G	V	D	F	V	A	A	.	S	F	I	R	K	R	S	D	V	I	E	I	R	E	H	L	.	.	.	.	K	A	H	G	G	E	N	I	H	I	I	S	K	I	E	N	Q	E	G	L	N	N	F	D	E	I	L
Query Conservation																					.			.										.																	.	.	.	.
Alig confidence																					.			.										.																	.	.	.	.
Template Conservation
Template Sequence		G	E	Q	T	R	G	V	S	F	S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	G	N	K	T	V	D	W	I	K	D	S	G
Template Known Secondary structure			T	T	S	T	T																		T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	T	T										T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.
Predicted Secondary structure																	.	.	.	.																															.																										.
Query SS confidence																	.	.	.	.																															.																										.
Query Sequence		E	A	S	D	G	I	M	V	A	R	G	D	L	G	V	.	.	.	.	E	I	P	V	E	E	V	I	F	A	Q	K	M	M	I	E	K	C	I	R	A	R	K	V	V	I	T	A	T	Q	.	M	L	D	S	M	I	K	N	P	R	P	T	R	A	E	A	G	D	V	A	N	A	I	L	D	.	G	T	D	A
Query Conservation																	.	.	.	.																															.																										.
Alig confidence																	.	.	.	.																															.											.	.	.	.												.
Template Conservation																																																														.	.	.	.
Template Sequence		A	K	V	L	N	L	L	T	K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	.	.	.	.	Y	V	K	S	L	V	E	H	L	S	K	E	H	I	E	R
Template Known Secondary structure												S								T																					T	T									T											.	.	.	.											T	S			S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	L	S	G	E	S	A	K	G	K	Y	P	L	E	A	V	S	I	M	A	T	I	C	E	R	T	D	R	V	M	N	S	R	L	E	F	N	N	D	N	R	K	L	R	I	T	E	A	V	C	R	G	A	V	E	T	A	E	K	L	D	A	P	L	I
Query Conservation
Alig confidence						.																																						.	.	.	.	.	.	.	.
Template Conservation						.																																						.	.	.	.	.	.	.	.
Template Sequence		I	F	L	P	.	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	D	I	H	F	E	F	H	G	H	N	D	Y	D	L	.	.	.	.	.	.	.	.	S	V	A	N	S	L	Q	A	I	R	A	G	V	K	G	L
Template Known Secondary structure						.		T	T																				T	T	S							B		T	T	S		.	.	.	.	.	.	.	.											T	T		S
Template Predicted Secondary structure						.																																						.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions