 |
Job Description | P0AD61 | Confidence | 22.42% | Date | Thu Jan 5 11:20:06 GMT 2012 |
Rank | 368 | Aligned Residues | 99 |
% Identity | 18% | Template | c2rkbE_ |
PDB info |
PDB header:lyase | Chain: E: PDB Molecule:serine dehydratase-like; |
PDBTitle: serine dehydratase like-1 from human cancer cells
|
Resolution | 2.80 Å |
|
 |
  |   |
346 | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | |
|
|
|
. | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | D | N | R | K | L | R | I | T | E | A | V | C | R | G | A | V | E | T | A | E | K | L | D | A | P | L | I | V | V | A | T | Q | G | G | K | S | A | R | A | V | R | K | Y | . |
. |
. |
. |
F | P | D | A | T | I | L | A | L | T | T | N | E | K | T | A | H | Q | L | V | L | S | K | G | V | V | P | Q | L | V | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |
|
|   |   | . | . | . | . |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
| . |
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |
|   |
Template Sequence |   |
E | N | V | Q | P | S | G | S | F | K | I | R | G | I | G | H | F | C | Q | E | M | A | K | K | G | C | R | H | L | V | C | S | S | . |
G | G | N | A | G | I | A | A | A | Y | A | A | R | K | L | G | I | P | A | T | I | V | L | P | E | S | T | S | L | Q | V | V | Q | R | L | Q | G | E | G | A | E | V | Q | L | T | G |
Template Known Secondary structure |   |
G | G | G | S | T | T | S | B | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
|
| . |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
  |   |
422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | I | T | S | T | D | D | F | Y | R | L | G | K | E | L | A | L | Q | S | G | L | A | H | K | G | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | . |
. |
V | W | D | E | A | N | L | R | A | Q | E | L | A | K | R | D | G | W | E | N | V | P | P |
Template Known Secondary structure |   |
S | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | |
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|