 |
Job Description | P0AD61 | Confidence | 22.61% | Date | Thu Jan 5 11:20:06 GMT 2012 |
Rank | 364 | Aligned Residues | 31 |
% Identity | 19% | Template | c2dt5A_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:at-rich dna-binding protein; |
PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8
|
Resolution | 2.16 Å |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | C | T | I | G | P | K | T | E | S | E | E | M | L | A | K | M | L | D | A | G | M | N | V | M | R | L | N | F | S | H | G | D |
Query Conservation |   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
| . | . |
|   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|   | . |
|
|
|
|   |
|   |   |
Template Sequence |   |
L | L | T | V | . |
. |
P | R | E | A | A | Q | K | A | A | D | L | L | V | A | A | G | I | K | G | . |
I | L | N | F | A | P | V | V |
Template Known Secondary structure |   |
 |  |
| S | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  | . |  |  |  |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | |
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
. | . | 170 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|