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Job DescriptionP0AD61
Confidence27.21%DateThu Jan 5 11:20:06 GMT 2012
Rank306Aligned Residues92
% Identity17%Templatec1ydyA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of periplasmic glycerophosphodiester2 phosphodiesterase from escherichia coli
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250.........260.........270.........280.........290.........300.......
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Query Sequence  NNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTD
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Template Sequence  GAMKQVAEYADGIGPDYHMLIEETSQP. GNIKLTGMVQDAQQNKLVVHPYTV. . RSDKLPEYTPDVNQLYDALYNKAGVN
Template Known Secondary structure  TTTT
SBGGGTB
TT
BT.TB

B
STT


B
B..
TTS

TT
SSTTS

S
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   265....270.........280.........290. ........300.........310..... ....320.........330.........340.
 
   308.310.........320.........
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Query Sequence  AVMLSGESAKGKYPLEAVSIMA
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Template Sequence  GLFT. . . . . . . DFPDKAVKFLN
Template Known Secondary structure  .......S

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   342... ....350......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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