Job Description P0AD61 Confidence 65.58% Date Thu Jan 5 11:20:06 GMT 2012 Rank 126 Aligned Residues 171 % Identity 13% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.											.	.	.	.	.	200	.	.	.	.	.	.	.	.	.												210	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	N	L	P	G	V	S	I	A	L	P	A	L	A	E	K	D	K	Q	D	L	I	F	G	C	E	Q	G	V	D	F	V	A	A	S	F	I	.	.	.	.	.	.	.	.	.	.	R	K	R	S	D	V	I	E	I	R	E	H	L	K	A	.	.	.	.	.	.	.	.	.	.	.	H	G	G	E	N	I
Query Conservation																																								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																								.										.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																								.
Template Sequence		G	V	S	I	.	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	.	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P
Template Known Secondary structure						.				T	T		S														G	G	G	.		S									T	T	S	T	T	G	G	G	G	G	S																								S	S	S	S	S
Template Predicted Secondary structure						.																								.
Template SS confidence
		309	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.															.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	I	I	S	K	I	E	N	Q	E	G	L	N	N	F	D	E	I	L	E	A	.	.	.	.	.	S	D	G	I	M	V	A	R	G	D	L	G	V	E	I	P	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	F	A	Q	K	M	M	I	E	K	C	I	R	A	R	K	V	V	I	T
Query Conservation																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A
Template Known Secondary structure									S																	T	T		S								B	S						G	G	G	T	T			S																						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	Q	M	L	D	S	M	I	K	N	P	R	P	T	R	A	E	A	G	D	V	A	N	A	I	L	D	G	T	D	A	V	M	L	S	G	E	S	A	K	G	K	Y	P	L	E	A	V	S	I	M	A	T	I	C	E	R	T	D	R	V	M	N	S	R	L	E	F	N
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Sequence		S	G	G	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	.	.	.	.	.	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y	N
Template Known Secondary structure			S	S			S	.	.	.	.	.	.	.	.	.	.	.	.										T	T							.	.	.	.	.	S							G	G	G																	T		S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template SS confidence
		505	.	.	.	.	510													.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.						.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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