Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD61
Confidence39.19%DateThu Jan 5 11:20:06 GMT 2012
Rank218Aligned Residues115
% Identity12%Templatec1rcxH_
PDB info PDB header:lyase (carbon-carbon)Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280. ........290.........300.........310.........320.........
Predicted Secondary structure 





....
















Query SS confidence 



























. . . .















































Query Sequence  EEVIFAQKMMIEKCIRARKVVITATQML. . . . DSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMA
Query Conservation 
 

  

 

  
   




 




....


   
 





 





 

 
 



 


 
 


  
  
 
Alig confidence 



























....








..........











....












Template Conservation 


 
  


 

  


   


 



     
 


  ..........
 
 

   

 ....    
  

  
 
Template Sequence  DRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVF. . . . . . . . . . ARELGVPIVMHD. . . . YLTGGFTANTTLS
Template Known Secondary structure  SS




SS..........T
S....
Template Predicted Secondary structure 








..........




....
Template SS confidence 















































































   216...220.........230.........240.........250...... ...260........ .270.........280.
 
   330.........340.........350.........360.........370.........380..
Predicted Secondary structure 


















Query SS confidence 




















































Query Sequence  TICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGK
Query Conservation   
   

                     

  
   
  
 
 


  
 

 
Alig confidence 




















































Template Conservation         


 

 
  

       


  




 





 
   
  

Template Sequence  HYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHSGTVVGK
Template Known Secondary structure  T

TTS
SSS


S


SSSS
Template Predicted Secondary structure 
























Template SS confidence 




















































   282.......290.........300.........310.........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions