Return to main results Retrieve Phyre Job Id

Job DescriptionP0AD61
Confidence41.85%DateThu Jan 5 11:20:06 GMT 2012
Rank206Aligned Residues103
% Identity9%Templatec1kkoB_
PDB info PDB header:lyaseChain: B: PDB Molecule:3-methylaspartate ammonia-lyase; PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase
Resolution1.33 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   172.......180........ .190....... ..200.........210.........220.........230..... ....240.
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Query Sequence  EKDKQDLIFGCEQGVDF. . . VAASFIRKR. . . . . SDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILE. . ASDGIM
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Template Sequence  VRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRXLTAITKELTRL. GSGVKIVAD. EWCNTYQDIVDFTDAGSCHXVQ
Template Known Secondary structure  TTGGGTTS





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   252.......260.........270.........280.........290........ .300....... ..310.........320.........
 
   242.......250.........260.........270.........280...
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Query Sequence  VARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDS
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Template Sequence  IKTPDLG. . . GIHNIV. . . . DAVLYCNKHGXEAYQGGTCNET
Template Known Secondary structure 
GGGGS...ST....TT



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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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