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Job DescriptionP0AD61
Confidence100.00%DateThu Jan 5 11:20:06 GMT 2012
Rank11Aligned Residues446
% Identity99%Templatec1e0tD_
PDB info PDB header:phosphotransferaseChain: D: PDB Molecule:pyruvate kinase; PDBTitle: r292d mutant of e. coli pyruvate kinase
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG
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Template Sequence  MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGG
Template Known Secondary structure 


S

GGG
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BB

BGGG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  NDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
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Template Sequence  NDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
Template Known Secondary structure 


TT
S
TT

BBTTBS
TT

TT
TTTTTT
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B
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGI
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Template Sequence  PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGI
Template Known Secondary structure  TT





SS
TT
SSS

ST
TT

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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
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Template Sequence  MVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMR. . . . . . . . . PTDAEAGDVANAILDGTDAVMLSGE. . . . . .
Template Known Secondary structure  S
TT



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TT
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   241........250.........260.........270.........280 .........290.........300.....
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  PLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALT
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Template Sequence  PLEAVSIMATICERTDRVMNS. . . . . . . . . RLEITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALT
Template Known Secondary structure 
TT


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TT
S
SSSTT

SS
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   321........330.........340. ........350.........360.........370.........380.........390.
 
   401........410.........420.........430.........440.........450.........460.........470
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Query Sequence  TNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
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Template Sequence  TNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
Template Known Secondary structure  S
TTSSTT
S


STSS

TT

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TT



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   401........410.........420.........430.........440.........450.........460.........470
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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