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Job DescriptionP0AD61
Confidence100.00%DateThu Jan 5 11:20:06 GMT 2012
Rank4Aligned Residues469
% Identity49%Templatec1aqfB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pyruvate kinase; PDBTitle: pyruvate kinase from rabbit muscle with mg, k, and l-2 phospholactate
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50........ .60.........70....
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Query Sequence  MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG. . . . . . KTAAILLDTKGPEIRT
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Template Sequence  ARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRT
Template Known Secondary structure 


S

TTS
ST

TTS

GGGTT
TTT









BB
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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   75....80 .........90.........100 .........110.........120.........130.........140.........150
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Query Sequence  MKLEGG. . NDVSLKAGQTFTFTTDKSVI. . GNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNG
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Template Sequence  GLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGG
Template Known Secondary structure 

BTTBSS


B

TT


GGGSS
BBTTBS
TT

TT
TTTT

SSS

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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  DLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNF
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Template Sequence  FLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKG. KNIKIISKIENHEGVRRF
Template Known Secondary structure  B

SS
B
TT





SS
TT
S
STTT
.SSS
ST
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   201........210.........220.........230.........240.........250.........260. ........270.........
 
   231........240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  DEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVM
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Template Sequence  DEILEASDGIMVARGDLGIEIPAEKVFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM
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SS
GGGT

SSTTGGGGTSSS

T
S
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   280.........290.........300.........310.........320.........330.........340.........350.........
 
   311........320.........330.........340......... 350.........360.........370.........380......
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Query Sequence  LSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDN. . . . RKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARA
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Template Sequence  LSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELARSSSHSTDLMEAMAMGSVEASYKCLAAALIVLTESGRSAHQ
Template Known Secondary structure  ST
S
S
GGG


TT
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SSS
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   360.........370.........380.........390.........400.........410.........420.........430.........
 
   387..390.........400.........410.........420.. .......430.........440.........450.........460
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Query Sequence  VRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKE. . . . . . ITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSG
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Template Sequence  VARYRPRAPIIAVTRNHQTARQAHLYRGIFPVVCKDPVQEAWAEDVDLRVNLAMNVGKARGFFKKGDVVIVLTGWRPGSG
Template Known Secondary structure  T

SS
S
GGGSSSB



S


SSTS

SS

SSTT
S
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   440.........450.........460.........470.........480.........490.........500.........510.........
 
   461........470
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Query Sequence  TTNTASVHVL
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Template Sequence  FTNTMRVVPV
Template Known Secondary structure  S


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   520.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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