Job Description P36562 Confidence 100.00% Date Thu Jan 5 11:53:20 GMT 2012 Rank 1 Aligned Residues 346 % Identity 79% Template d1l5oa_ SCOP info Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Resolution 1.60

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	L	L	N	T	I	P	A	I	D	S	T	A	M	S	R	A	Q	R	H	I	D	G	L	L	K	P	V	G	S	L	G	K	L	E	V	L	A	I	Q	L	A	G	M	P	G	L	N	G	I	P	H	V	G	K	K	A	V	L	V	M	C	A	D	H	G	V	W	E	E	G	V	A	I	S	P	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	A	L	L	R	D	I	P	A	P	D	A	E	A	M	A	R	T	Q	Q	H	I	D	G	L	L	K	P	P	G	S	L	G	R	L	E	T	L	A	V	Q	L	A	G	M	P	G	L	N	G	T	P	Q	V	G	E	K	A	V	L	V	M	C	A	D	H	G	V	W	D	E	G	V	A	V	S	P	K	I
Template Known Secondary structure								T																		T	B	S	S	S	T	T	T	T												T		G	G	G	T	T	S															B	G	G	G	G	G	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	I	Q	A	E	N	M	T	R	G	T	T	G	V	C	V	L	A	E	Q	A	G	A	N	V	H	V	I	D	V	G	I	D	T	A	E	P	I	P	G	L	I	N	M	R	V	A	R	G	S	G	N	I	A	S	A	P	A	M	S	R	R	Q	A	E	K	L	L	L	D	V	I	C	Y	T	Q	E	L
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		V	T	A	I	Q	A	A	N	M	T	R	G	T	T	G	V	C	V	L	A	A	Q	A	G	A	K	V	H	V	I	D	V	G	I	D	A	E	.	P	I	P	G	V	V	N	M	R	V	A	R	G	C	G	N	I	A	V	G	P	A	M	S	R	L	Q	A	E	A	L	L	L	E	V	S	R	Y	T	C	D	L
Template Known Secondary structure											T	T	T		S										T											S	S	S	.			T	T	S						S	S	S	B			T	T	T	S		S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	G	V	T	L	F	G	V	G	E	L	G	M	A	N	T	T	P	A	A	A	I	V	S	T	I	T	G	R	D	P	E	E	V	V	G	I	G	A	N	L	P	T	D	K	L	A	N	K	I	D	V	V	R	R	A	I	T	L	N	Q	P	N	P	Q	D	G	V	D	V	L	A	K	V	G	G	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	R	G	V	T	L	F	G	V	G	E	L	G	M	A	N	T	T	P	A	A	A	M	V	S	V	F	T	G	S	D	A	K	E	V	V	G	I	G	A	N	L	P	P	S	R	I	D	N	K	V	D	V	V	R	R	A	I	A	I	N	Q	P	N	P	R	D	G	I	D	V	L	S	K	V	G	G	F	D
Template Known Secondary structure			T	T	T											T	T	T													T										T	T	T			G	G	G																			T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	G	I	A	G	V	M	L	G	A	A	S	C	G	L	P	V	L	L	D	G	F	L	S	Y	A	A	A	L	A	A	C	Q	M	S	P	A	I	K	P	Y	L	I	P	S	H	L	S	A	E	K	G	A	R	I	A	L	S	H	L	G	L	E	P	Y	L	N	M	E	M	R	L	G	E	G	S	G	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	G	M	T	G	V	M	L	G	A	A	R	C	G	L	P	V	L	L	D	G	F	L	S	Y	S	A	A	L	A	A	C	Q	I	A	P	A	V	R	P	Y	L	I	P	S	H	F	S	A	E	K	G	A	R	I	A	L	A	H	L	S	M	E	P	Y	L	H	M	A	M	R	L	G	E	G	S	G	A	A
Template Known Secondary structure															T	T							S															G	G	G	G	G	G					B				S	T	T								T	T				S	B								T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	M	P	I	I	E	A	A	C	A	I	Y	N	N	M	G	E	L	A	A	S	N	I	V	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	M	P	I	V	E	A	A	C	A	M	F	H	N	M	G	E	L	A	A	S	N	I	V	L	P
Template Known Secondary structure																			B	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions