Job Description P36562 Confidence 100.00% Date Thu Jan 5 11:53:20 GMT 2012 Rank 2 Aligned Residues 331 % Identity 39% Template d1j33a_ SCOP info Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Resolution 2.00

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	M	S	R	A	Q	R	H	I	D	G	L	L	K	P	V	G	S	L	G	K	L	E	V	L	A	I	Q	L	A	G	M	P	G	L	N	G	I	P	H	V	G	K	K	A	V	L	V	M	C	A	D	H	G	V	W	E	E	G	V	A	I	S	P	K	E	V	T	A	I	Q	A	E	N	M	T	R	G
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		P	E	V	F	A	Q	A	R	L	R	M	D	Q	L	T	K	P	P	R	A	L	G	Y	L	E	E	V	A	L	R	L	A	A	L	Q	G	.	R	V	K	P	E	L	G	R	G	A	V	V	V	A	A	A	D	H	G	V	V	A	E	G	V	S	A	Y	P	Q	E	V	T	R	Q	M	V	L	N	F	L	R	G
Template Known Secondary structure													T	T	B	S	S		T	T	T	T															T	.		S	S																G	G	G	G	G				S	S		T	T												T
Template Predicted Secondary structure																																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	T	G	V	C	V	L	A	E	Q	A	G	A	N	V	H	V	I	D	V	G	I	D	T	A	.	E	P	I	P	G	L	I	N	M	R	V	A	R	G	S	G	N	I	A	S	A	P	A	M	S	R	R	Q	A	E	K	L	L	L	D	V	I	C	Y	T	Q	E	L	A	K	N	G	V	T	L	F	G	V	G
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		G	A	A	I	N	Q	F	A	L	A	A	D	C	A	V	Y	V	L	D	V	G	V	V	G	E	L	P	D	H	P	G	L	L	K	R	K	V	R	P	G	T	A	N	L	A	Q	G	P	A	M	T	P	E	E	A	E	R	A	L	L	A	G	R	E	A	A	R	R	A	I	A	E	G	A	T	L	L	A	A	G
Template Known Secondary structure			S									T	T											S	S						T	T							S	S	S				T	T	S	S		S	S																						T	T		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	G	M	A	N	T	T	P	A	A	A	I	V	S	T	I	T	G	R	D	P	E	E	V	V	G	I	G	A	N	L	P	T	D	K	L	A	N	K	I	D	V	V	R	R	A	I	T	L	N	Q	P	N	P	Q	D	G	V	D	V	L	A	K	V	G	G	F	D	L	V	G	I	A	G	V	M	L	G	A
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		D	M	G	I	G	N	T	T	A	A	A	A	L	T	A	A	L	L	G	L	P	P	E	A	V	V	G	R	G	T	G	V	G	E	E	G	L	R	R	K	R	Q	A	V	A	R	A	L	A	R	L	H	P	G	.	M	G	P	L	E	V	A	A	E	V	G	G	I	E	L	V	A	I	A	G	I	Y	L	E	G
Template Known Secondary structure					T	T														T										T	T	T																		T	T			T	T	.											S
Template Predicted Secondary structure																																																								.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	C	G	L	P	V	L	L	D	G	F	L	S	Y	A	A	A	L	A	A	C	Q	M	S	P	A	I	K	P	Y	L	I	P	S	H	L	S	A	E	K	G	A	R	I	A	L	S	H	L	G	L	E	P	Y	L	N	M	E	M	R	L	G	E	G	S	G	A	A	L	A	M	P	I	I	E	A	A	C	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	G	L	P	L	V	L	D	G	F	P	V	T	A	G	A	L	L	A	W	K	M	A	P	G	L	R	D	H	L	F	A	G	H	L	S	R	E	P	G	H	R	H	Q	L	E	A	L	G	L	R	P	L	L	D	L	D	L	A	L	G	E	G	T	G	A	V	L	A	M	P	L	L	R	A	A	A	R
Template Known Secondary structure				T	T							S														S	G	G	G	G	G	G					B			S												T				S	B		S						T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	N	N	M	G	E	L	A	A	S	N	I	V	L
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		I	L	H	.	M	A	T	F	Q	E	A	G	V	S	R
Template Known Secondary structure			T	T	.	S		B					T
Template Predicted Secondary structure					.
Template SS confidence
		321	.	.		.	.	.	.	.	.	330	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions