Job Description P36562 Confidence 100.00% Date Thu Jan 5 11:53:20 GMT 2012 Rank 4 Aligned Residues 209 % Identity 20% Template c3u4gA_ PDB info PDB header:transferase Chain: A: PDB Molecule:namn:dmb phosphoribosyltransferase; PDBTitle: the structure of cobt from pyrococcus horikoshii Resolution 1.90 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	P	K	E	V	T	A	I	Q	A	E	N	M	T	R	G	T	T	G	V	C	V	L	A	E	Q	A	G	A	N	V	H	V	I	D	V	G	I	D	T	A	E	P	I	P	G	L	I	N	M	R	V	A	R	G	S	G	N	I	A	S	A	P	A	M	S	R	R	Q	A	E	K	L	L	L	D	V	I	C
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																					.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																					.	.
Template Sequence		P	T	P	A	I	I	T	K	A	A	R	E	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	P	I	L	V	V	R	G	G	T	Y	L	A	P	L	I	P	H	V	.	.	H	I	S	N	V	V	G	R	D	F	R	R	E	P	A	L	P	E	V	E	.	.	V	I	I	E	R	A	K	L
Template Known Secondary structure		B		T												.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S			S	S				.	.							B			T	T	T	S		S		T	T			.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.																					.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.															.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		Y	T	Q	E	L	A	K	N	G	V	T	L	F	G	V	G	E	L	G	M	A	N	T	T	P	A	A	A	I	V	S	T	I	T	G	R	D	P	E	E	V	V	G	I	G	A	N	L	P	T	D	K	L	A	N	K	I	D	V	V	R	R	A	I	T	L	.	.	.	.	N	Q	P	N	P	Q	D	G	V	D
Query Conservation																																																																				.	.	.	.
Alig confidence							.																												.			.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation							.																												.			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	K	E	L	.	E	K	I	A	N	E	I	V	I	G	E	S	T	P	G	G	T	T	T	A	Q	A	I	L	W	A	L	.	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	P	Q	E	L	K	E	K	V	I	K	E	G	F	K	R	V	G	I	E	K	G	G	L	K	D	K	P	L	E
Template Known Secondary structure							.	T	T	T	B	S									T	T												T	.	T		.	.	.	.	.	.	.	.	.	.	.	.	.																			T			T	T	T	T	T	T
Template Predicted Secondary structure							.																												.			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.														.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		V	L	A	K	V	G	G	F	D	L	V	G	I	A	G	V	M	L	G	A	A	S	C	G	L	P	V	L	L	D	G	F	L	S	Y	A	A	A	L	A	A	C	Q	M	S	P	A	I	K	P	Y	L	I	P	S	H	L	.	.	.	S	A	E	K	G	A	R	I	A	L	S	H	L	G	L	E	P	Y	L	N
Query Conservation																																																											.	.	.
Alig confidence																						.	.																																				.	.	.
Template Conservation																						.	.
Template Sequence		A	L	K	E	F	G	D	P	X	I	A	T	V	L	G	L	S	L	G	F	.	.	G	G	D	V	V	L	A	G	G	T	Q	X	L	A	V	S	A	L	L	K	S	L	G	E	D	L	S	R	F	X	I	A	T	T	R	W	V	V	E	D	P	S	A	T	F	I	E	T	A	R	E	I	G	I	I	S	Y	V
Template Known Secondary structure																						.	.		S						S	S													T	T				T	T													T	T											T
Template Predicted Secondary structure																						.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		312	.	.	.	.	.																	.	.	320	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	M	R	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	S	G	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	L	D	F	S	K	S	K	F	K	G	L	R	D	Y	E	R	G	Y	V	K	E	G	V	G	A
Template Known Secondary structure							T	T		S						G	G	G	G	T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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