Job Description P36562 Confidence 100.00% Date Thu Jan 5 11:53:20 GMT 2012 Rank 3 Aligned Residues 263 % Identity 21% Template c3l0zC_ PDB info PDB header:transferase Chain: C: PDB Molecule:putative nicotinate-nucleotide-dimethylbenzimidazole PDBTitle: crystal structure of a putative nicotinate-nucleotide-2 dimethylbenzimidazole phosphoribosyltransferase from3 methanocaldococcus jannaschii dsm 2661 Resolution 2.65 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	A	G	M	P	G	L	N	G	I	P	H	V	G	K	K	A	V	L	V	M	C	A	D	H	G	V	W	E	E	G	V	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	K	E	V	T	A	I	Q	A	E	N	M	T	R	G	T	T	G	V	C	V	L	A	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		F	L	D	K	I	K	G	R	.	.	.	.	.	.	.	.	N	P	L	F	T	C	V	I	S	S	I	E	T	T	L	S	I	P	I	S	G	V	H	R	D	V	I	K	Y	T	P	S	A	D	V	E	L	V	F	Y	G	K	S	L	T	L	K	T	P	P	I	D	A	T	G	S	P	T	P	A	T	I	T	R
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.											B	G	G	G	G	T	S			S	S	S		T	T	T	T	T	T												S	S		S	S	S		S		S	B		T	T	S		B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.									.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
						105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Q	A	G	A	N	V	H	V	I	D	V	G	I	D	T	A	E	P	I	P	G	L	I	N	M	R	V	A	R	G	S	G	N	I	A	S	A	P	A	M	S	R	R	Q	A	E	K	L	L	L	D	V	I	C	Y	T	Q	E	L	A	K	N	G	V	T	L	F	G	V	G	E	L	G	M	A	N
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																										.	.																		.	.														.	.	.
Template Conservation																															.	.																		.	.														.	.	.
Template Sequence		A	C	V	E	L	K	N	I	K	N	L	H	I	D	A	G	A	F	V	K	P	K	I	P	F	I	E	I	D	.	.	E	K	P	T	G	R	I	E	E	G	K	A	X	N	N	S	K	.	.	E	L	Y	X	K	G	Y	L	L	G	K	N	L	.	.	.	D	A	E	L	L	I	V	G	E	S	V	P	G	G
Template Known Secondary structure							T	T			B					S			S	S			S	S					S		.	.		S		B			G	G	G	T		S		S				.	.												T		.	.	.			S									T	T
Template Predicted Secondary structure																															.	.																		.	.														.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		T	T	P	A	A	A	I	V	S	T	I	T	G	R	D	P	E	E	V	V	G	I	G	A	N	L	P	T	D	K	L	A	N	K	I	D	V	V	R	R	A	I	T	L	N	Q	.	P	N	P	Q	D	G	V	D	V	L	A	K	V	G	G	F	D	L	V	G	I	A	G	V	M	L	G	A	A	S	C	G	L
Query Conservation																																																.
Alig confidence													.	.	.	.	.	.	.	.																												.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		T	T	T	A	L	G	V	L	L	G	L	.	.	.	.	.	.	.	.	G	Y	D	A	E	G	K	V	N	N	P	H	E	L	K	I	K	V	V	R	E	G	L	K	K	A	G	I	N	E	K	S	S	V	F	D	V	L	N	A	V	G	D	K	X	X	P	V	V	A	G	L	A	I	S	F	A	E	R	N	K
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	T				T	T	T																							S	S													T															T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.									.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.							.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	L	L	D	G	F	L	S	Y	A	A	A	L	A	A	C	Q	.	.	.	.	.	.	M	S	P	A	I	K	P	Y	L	I	P	S	H	L	S	A	E	K	G	A	.	.	R	I	A	L	S	H	L	G	L	E	P	Y	L	N	M	E	M	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	I	L	A	G	G	T	Q	X	S	A	V	L	A	V	I	K	E	I	N	K	K	V	L	D	K	N	L	I	A	I	G	T	T	E	F	V	L	N	D	K	K	G	D	L	K	G	I	V	E	Q	I	G	N	V	P	V	L	A	S	K	F	Y	F	E	K	A	K	I	E	G	L	K	N	Y	C	K	G	S
Template Known Secondary structure							S	S	S																		T	T	T	T											T		T	T												S										G	G	G		S	S	T	T	T	T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
					317	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	E	G	S	G	A	A	L	A	M	P	I	I	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	K	E	G	V	G	A	G	G	I	A	V	Y	S	I	V	N
Template Known Secondary structure						T	T											T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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