Return to main results Retrieve Phyre Job Id

Job DescriptionP19319
Confidence99.93%DateThu Jan 5 11:37:17 GMT 2012
Rank32Aligned Residues132
% Identity20%Templated1vlfm1
SCOP infoDouble psi beta-barrel ADC-like Formate dehydrogenase/DMSO reductase, C-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1083......1090.........1100......... 1110.........1120.........1130.........1140.........1150..
Predicted Secondary structure 














..........















Query SS confidence 


























. . . . . . . . . .










































Query Sequence  EKALNFLTPHQKWGIHSTYSENLLMLT. . . . . . . . . . LSRGGPIVWISETDARELTIVDNDWVEVFNANGALTARAVVSQ
Query Conservation   


 
 
 
     

    
   
 ..........
    
 
 


 

  






 
 
 
 

 
   
 

 
Alig confidence 


















.






..........










































Template Conservation 



 
 
       

  .                        
 
 
 

   

  

 
 
 
  
     
 
  
Template Sequence  KYPLGMLSPHPRFSMHTMG. DGKNSYMNYIKDHRVEVDGYKYWIMRVNSIDAEARGIKNGDLIRAYNDRGSVILAAQVTE
Template Known Secondary structure 






TTSBTTBS.SSTT
GGGGSTTTTTTTT

TT
TTS
Template Predicted Secondary structure 









.




























Template SS confidence 















































































   729730.........740....... ..750.........760.........770.........780.........790.........800.......
 
   1153......1160.........1170.........1180.........1190. ........1200.........1210.........1220...... ...
Predicted Secondary structure 

































.





















..


Query SS confidence 






































.


































. .


Query Sequence  RVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVC. PKPTHMIGGYAQLAWGFNYYGTVGSNRDEFIMIRK. . MKN
Query Conservation 

 



 
 
                
    
  
   .  
    
                           ..   
Alig confidence 






































.


..




..............










..


Template Conservation   
 

 
    
                
   
 

     
 ..     ..............      
 


  

 
Template Sequence  CLQPGTVHSYESCAVYDPLGTAGKSADRGGCINILTPDRYISK. . YACGM. . . . . . . . . . . . . . ANNTALVEIEKWDGDK
Template Known Secondary structure  SS
TT

S





BSSSTTTS
BSS

GGGSS

S
SSS..S



..............
TT


S

Template Predicted Secondary structure 

































..




..............







Template SS confidence 















































































   808.810.........820.........830.........840.........850 ..... ....860.........870.
 
   1230.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  VN
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  YE
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   872.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions