 |
Job Description | P19319 | Confidence | 54.07% | Date | Thu Jan 5 11:37:17 GMT 2012 |
Rank | 127 | Aligned Residues | 45 |
% Identity | 16% | Template | d1cr5a1 |
SCOP info | Double psi beta-barrel
| ADC-like
| Cdc48 N-terminal domain-like
|
Resolution | 2.30 |
|
  |   |
1109 | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | S | R | G | G | P | I | V | W | I | S | E | T | D | A | R | E | L | T | I | V | D | N | D | W | V | E | V | F | N | A | N | G | A | L | T | A | R | A | V | V | S | Q | R | V | P | P | G | M | T | M | M |
Query Conservation |   |
  |
|   |   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
|   |
|   |
|
|   |
|   |   |   |
|   |
|
|   |
|
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |
|
|
|
|   |   |
| . | . | . | . | . |
|   |   |   |   |
|
|
|
| . | . | . |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
N | S | Y | A | L | A | N | V | A | A | V | S | P | N | D | . |
. |
. |
. |
. |
F | P | N | N | I | Y | I | I | I | . |
. |
. |
D | N | L | F | V | F | T | T | R | H | S | N | D | I | P | P | G | T | I | G | F |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |  |  |  |  |
| T | T | T | . | . | . | . | . | S |
| S | S |
|  |  |  |  | . | . | . | T | T | T |  |  |  |  |  |  |  |
| T | T | S |
| T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  | . | . | . |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 60 | |
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|