 |
Job Description | P19319 | Confidence | 35.89% | Date | Thu Jan 5 11:37:17 GMT 2012 |
Rank | 171 | Aligned Residues | 59 |
% Identity | 19% | Template | c3uvzB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; |
PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria
|
Resolution | 2.20 Å |
|
 |
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Y | I | I | A | W | G | S | N | V | P | Q | T | R | T | P | D | A | H | F | F | T | E | V | R | Y | K | G | T | K | T | I | A | I | T | P | D | Y | S | E | V | A | K | . |
L | C | D | Q | W | L | A | P | K | Q | G | T | D | S | A | L | A | M | A | M | G | H |
Query Conservation |   |
  |   |
|
|   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   | . |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|   |
|   | . | . | . | . | . |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   | . |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
A | W | L | G | M | V | G | G | G | Q | . |
. |
. |
. |
. |
L | G | R | M | F | C | F | A | A | Q | S | M | G | Y | R | V | A | V | L | D | P | D | P | A | S | P | A | G | A | V | A | D | R | H | L | R | A | A | Y | . |
D | D | E | A | A | L | A | E | L | A | G |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S |
| T | T |
| T | T | T | T | T | S | S |  |  |  |
| S |
| T | . | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|