Return to main results Retrieve Phyre Job Id

Job DescriptionP19319
Confidence34.76%DateThu Jan 5 11:37:17 GMT 2012
Rank173Aligned Residues20
% Identity35%Templatec3lpeF_
PDB info PDB header:transferaseChain: F: PDB Molecule:dna-directed rna polymerase subunit e''; PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   278.280.........290.......
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  TIAITPDYSEVAKLCDQWLA
Query Conservation 






 
 

  

 


Alig confidence 



















Template Conservation 


 








 
 
  
Template Sequence  LIVINPEKSEIAKKAGIDIK
Template Known Secondary structure  S
TTT
TT

S
Template Predicted Secondary structure 







Template SS confidence 



















   31........40.........50
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions