Job Description P19319 Confidence 95.44% Date Thu Jan 5 11:37:17 GMT 2012 Rank 59 Aligned Residues 147 % Identity 11% Template c3fxaA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution Resolution 1.60 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	N	Q	L	I	A	A	A	N	V	W	T	I	K	T	Y	G	P	D	R	V	A	G	F	S	P	I	P	A	M	S	M	V	S	Y	A	A	G	T	R	Y	L	S	L	L	G	G	T	C	L	S	F	Y	D	W	Y	C	D	L	P	P	A	S	P	M	T	W	G	E	Q	T	D	V	P	E	S	A	D
Query Conservation
Alig confidence																.	.	.	.	.	.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	A	L	V	K	T	V	E	K	I	A	E	C	.	.	.	.	.	.	T	G	K	I	V	V	A	G	C	G	T	S	G	V	A	A	K	K	L	V	H	S	F	N	C	I	.	E	R	P	A	V	F	L	T	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	V	H	G	T	L	G	V
Template Known Secondary structure																.	.	.	.	.	.	S	S								T																T	.	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	G	G	G	G
Template Predicted Secondary structure																.	.	.	.	.	.																											.											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.															80	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.												.	.	.	.	.	.	310	.
Predicted Secondary structure																																															.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Y	N	S	S	Y	I	I	A	W	G	S	N	V	P	Q	T	R	T	P	D	A	H	F	F	T	E	V	R	Y	K	G	T	K	T	I	A	I	T	P	D	Y	S	E	V	.	A	K	L	C	D	Q	W	L	A	P	K	Q	G	T	D	.	.	.	.	.	.	.	.	.	.	.	S	A	L	A	M	A	M	G
Query Conservation																																															.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.									.																										.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.									.
Template Sequence		L	Q	K	E	D	I	L	I	L	I	.	S	K	G	G	N	T	G	E	.	L	L	N	L	I	P	A	C	K	T	K	G	S	T	L	I	G	V	T	E	N	P	D	S	V	I	A	K	E	A	D	I	F	F	P	V	S	V	S	K	E	P	D	P	F	N	X	L	A	T	A	S	T	X	A	V	I	A	S	F
Template Known Secondary structure				T	T							.		S	S	S					.			T	T								T								S		T	T	S							S								S				S	T	T	S		S
Template Predicted Secondary structure												.									.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		312	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		H	V	I	L	.	.	.	K	E	F	H	L	D	N	P	S	D	Y	F	I	N	Y	C	R	R	Y	S	D	M
Query Conservation						.	.	.
Alig confidence						.	.	.									.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		D	A	V	I	V	C	L	X	T	Y	X	N	Y	T	K	.	.	.	.	E	Q	F	S	V	I	H	P	G	G
Template Known Secondary structure												T	T				.	.	.	.
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions