Job Description P19319 Confidence 100.00% Date Thu Jan 5 11:37:17 GMT 2012 Rank 1 Aligned Residues 1242 % Identity 79% Template c1y5iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:respiratory nitrate reductase 1 alpha chain; PDBTitle: the crystal structure of the narghi mutant nari-k86a Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	L	D	R	F	R	Y	F	K	Q	K	G	E	T	F	A	D	G	H	G	Q	V	M	H	S	N	R	D	W	E	D	S	Y	R	Q	R	W	Q	F	D	K	I	V	R	S	T	H	G	V	N	C	T	G	S	C	S	W	K	I	Y	V	K	N	G	L	V	T	W	E	I	Q	Q	T	D	Y	P	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	F	L	D	R	F	R	Y	F	K	Q	K	G	E	T	F	A	D	G	H	G	Q	L	L	N	T	N	R	D	W	E	D	G	Y	R	Q	R	W	Q	H	D	K	I	V	R	S	T	H	G	V	N	C	T	G	S	C	S	W	K	I	Y	V	K	N	G	L	V	T	W	E	T	Q	Q	T	D	Y	P	R	T
Template Known Secondary structure							G	G	G	T	G	G	G						T	T	T	T									G	G	G										S									S	S	S	S											T	T											S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	L	P	N	H	E	P	R	G	C	P	R	G	A	S	Y	S	W	Y	L	Y	S	A	N	R	L	K	Y	P	L	I	R	K	R	L	I	E	L	W	R	E	A	L	K	Q	H	S	D	P	V	L	A	W	A	S	I	M	N	D	P	Q	K	C	L	S	Y	K	Q	V	R	G	R	G	G	F	I	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	D	L	P	N	H	E	P	R	G	C	P	R	G	A	S	Y	S	W	Y	L	Y	S	A	N	R	L	K	Y	P	M	M	R	K	R	L	M	K	M	W	R	E	A	K	A	L	H	S	D	P	V	E	A	W	A	S	I	I	E	D	A	D	K	A	K	S	F	K	Q	A	R	G	R	G	G	F	V	R	S
Template Known Secondary structure			T	T	S				T	T								T	G	G	G	G	G	T	S	T	T	B			S																T	T		S	S										T										T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	Q	E	L	N	Q	L	I	A	A	A	N	V	W	T	I	K	T	Y	G	P	D	R	V	A	G	F	S	P	I	P	A	M	S	M	V	S	Y	A	A	G	T	R	Y	L	S	L	L	G	G	T	C	L	S	F	Y	D	W	Y	C	D	L	P	P	A	S	P	M	T	W	G	E	Q	T	D	V	P	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	W	Q	E	V	N	E	L	I	A	A	S	N	V	Y	T	I	K	N	Y	G	P	D	R	V	A	G	F	S	P	I	P	A	M	S	M	V	S	Y	A	S	G	A	R	Y	L	S	L	I	G	G	T	C	L	S	F	Y	D	W	Y	C	D	L	P	P	A	S	P	Q	T	W	G	E	Q	T	D	V	P	E	S
Template Known Secondary structure																					T		G	G	G								G	G	G	S															T							T	T	T	T	T		S		T							S		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	W	Y	N	S	S	Y	I	I	A	W	G	S	N	V	P	Q	T	R	T	P	D	A	H	F	F	T	E	V	R	Y	K	G	T	K	T	I	A	I	T	P	D	Y	S	E	V	A	K	L	C	D	Q	W	L	A	P	K	Q	G	T	D	S	A	L	A	M	A	M	G	H	V	I	L	K	E	F	H	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	W	Y	N	S	S	Y	I	I	A	W	G	S	N	V	P	Q	T	R	T	P	D	A	H	F	F	T	E	V	R	Y	K	G	T	K	T	V	A	V	T	P	D	Y	A	E	I	A	K	L	C	D	L	W	L	A	P	K	Q	G	T	D	A	A	M	A	L	A	M	G	H	V	M	L	R	E	F	H	L	D
Template Known Secondary structure					T	T		S						S							S	G	G	G								G	G	G	T								S	S							T	S	S							T	T																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	S	D	Y	F	I	N	Y	C	R	R	Y	S	D	M	P	M	L	V	M	L	E	P	R	D	D	G	S	Y	V	P	G	R	M	I	R	A	S	D	L	V	D	G	L	G	E	S	N	N	P	Q	W	K	T	V	A	V	N	T	A	G	E	L	V	V	P	N	G	S	I	G	F	R	W	G	E	K	G	K
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		N	P	S	Q	Y	F	T	D	Y	V	R	R	Y	T	D	M	P	M	L	V	M	L	E	E	R	.	D	G	Y	Y	A	A	G	R	M	L	R	A	A	D	L	V	D	A	L	G	Q	E	N	N	P	E	W	K	T	V	A	F	N	T	N	G	E	M	V	A	P	N	G	S	I	G	F	R	W	G	E	K	G	K
Template Known Secondary structure		S													B	S	T	T	B								.	S	S	S								B	G	G	G	B	T	T	G	G	G			S	S	G	G	G		B				B	T	T	S					B	T	T	S	G	G	G	T	S	S	S		S
Template Predicted Secondary structure																											.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		402	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		W	N	L	E	.	.	S	I	A	A	G	T	E	T	E	L	S	L	T	L	L	G	Q	H	D	A	V	A	G	V	A	F	P	Y	F	G	G	I	E	N	P	H	F	R	S	V	K	H	N	P	V	L	V	R	Q	L	P	V	K	N	L	T	L	V	D	G	N	T	C	P	V	V	S	V	Y	D	L	V	L	A
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		W	N	L	E	Q	R	D	G	K	T	G	E	E	T	E	L	Q	L	S	L	L	G	S	Q	D	E	I	A	E	V	G	F	P	Y	F	G	G	D	G	T	E	H	F	N	K	V	E	L	E	N	V	L	L	H	K	L	P	V	K	R	L	Q	L	A	D	G	S	T	A	L	V	T	T	V	Y	D	L	T	L	A
Template Known Secondary structure			S		S	S	B	B	T	T	T			B			B					T	T	S		S											T	T				T	T	S							S													B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	G	L	D	R	G	L	E	D	E	N	S	A	K	D	Y	A	E	I	K	P	Y	T	P	A	W	G	E	Q	I	T	G	V	P	R	Q	Y	I	E	T	I	A	R	E	F	A	D	T	A	H	K	T	H	G	R	S	M	I	I	L	G	A	G	V	N	H	W	Y	H	M	D	M	N	Y	R	G	M	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	G	L	E	R	G	L	N	D	V	N	C	A	T	S	Y	D	D	V	K	A	Y	T	P	A	W	A	E	Q	I	T	G	V	S	R	S	Q	I	I	R	I	A	R	E	F	A	D	N	A	D	K	T	H	G	R	S	M	I	I	V	G	A	G	L	N	H	W	Y	H	L	D	M	N	Y	R	G	L	I	N
Template Known Secondary structure			T	T	B			S	S			T	T	S	B	S	S	T	T	S			T	T																															T	S												T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	I	F	C	G	C	V	G	Q	S	G	G	G	W	A	H	Y	V	G	Q	E	K	L	R	P	Q	T	G	W	L	P	L	A	F	A	L	D	W	N	R	P	P	R	Q	M	N	S	T	S	F	F	Y	N	H	S	S	Q	W	R	Y	E	K	V	S	A	Q	E	L	L	S	P	L	A	D	A	S	K	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	I	F	C	G	C	V	G	Q	S	G	G	G	W	A	H	Y	V	G	Q	E	K	L	R	P	Q	T	G	W	Q	P	L	A	F	A	L	D	W	Q	R	P	A	R	H	M	N	S	T	S	Y	F	Y	N	H	S	S	Q	W	R	Y	E	T	V	T	A	E	E	L	L	S	P	M	A	D	K	S	R	Y	T
Template Known Secondary structure						T	T		T	T	S	T	T							S	S					S	S										T	T	T	T		S															T	T	G	G	G	G					S	G	G	G	S		T	T	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	L	I	D	F	N	V	R	A	E	R	M	G	W	L	P	S	A	P	Q	L	G	R	N	P	L	G	I	K	A	E	A	D	K	A	G	L	S	P	T	E	F	T	A	Q	A	L	K	S	G	D	L	R	M	A	C	E	Q	P	D	S	S	S	N	H	P	R	N	L	F	V	W	R	S	N	L	L	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	L	I	D	F	N	V	R	A	E	R	M	G	W	L	P	S	A	P	Q	L	G	T	N	P	L	T	I	A	G	E	A	E	K	A	G	M	N	P	V	D	Y	T	V	K	S	L	K	E	G	S	I	R	F	A	A	E	Q	P	E	N	G	K	N	H	P	R	N	L	F	I	W	R	S	N	L	L	G	S
Template Known Secondary structure		S												T	T	S	S			S	S		B	S	S		T	T	S								T	T	S													T	S	S		B	G	G	G		T	T	S	S	S	S	S								S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	G	H	E	Y	M	Q	K	Y	L	L	G	T	E	S	G	I	Q	G	E	E	L	G	A	S	D	G	I	K	P	E	E	V	E	W	Q	T	A	A	I	E	G	K	L	D	L	L	V	T	L	D	F	R	M	S	S	T	C	L	F	S	D	I	V	L	P	T	A	T	W	Y	E	K	D	D	M	N	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	K	G	H	E	F	M	L	K	Y	L	L	G	T	E	H	G	I	Q	G	K	D	L	G	Q	Q	G	G	V	K	P	E	E	V	D	W	Q	D	N	G	L	E	G	K	L	D	L	V	V	T	L	D	F	R	L	S	S	T	C	L	Y	S	D	I	I	L	P	T	A	T	W	Y	E	K	D	D	M	N	T
Template Known Secondary structure		T		S	S								T	T		S						S			T	T	T	T	T					S	S	S				S	S							S							S	B							T		S					B			T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	M	H	P	F	I	H	P	L	S	A	A	V	D	P	A	W	E	S	R	S	D	W	E	I	Y	K	G	I	A	K	A	F	S	Q	V	C	V	G	H	L	G	K	E	T	D	V	V	L	Q	P	L	L	H	D	S	P	A	E	L	S	Q	P	C	E	V	L	D	W	R	K	G	E	C	D	L	I	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	M	H	P	F	I	H	P	L	S	A	A	V	D	P	A	W	E	A	K	S	D	W	E	I	Y	K	A	I	A	K	K	F	S	E	V	C	V	G	H	L	G	K	E	T	D	I	V	T	L	P	I	Q	H	D	S	A	A	E	L	A	Q	P	L	D	V	K	D	W	K	K	G	E	C	D	L	I	P	G
Template Known Secondary structure			S	S	S	S								S	S			S	T	T		B																	T	T	T	T													B	T	T	S	G	G	G				S	S	S				G	G	G	T	S	S				B	T
Template Predicted Secondary structure
Template SS confidence
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	A	P	N	I	V	A	V	E	R	D	Y	P	A	T	Y	E	R	F	T	S	L	G	P	L	M	D	K	L	G	N	G	G	K	G	I	S	W	N	T	Q	D	E	I	D	F	L	G	K	L	N	Y	T	K	R	D	G	P	A	Q	G	R	P	L	I	D	T	A	I	D	A	S	E	V	I	L	A	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	A	P	H	I	M	V	V	E	R	D	Y	P	A	T	Y	E	R	F	T	S	I	G	P	L	M	E	K	I	G	N	G	G	K	G	I	A	W	N	T	Q	S	E	M	D	L	L	R	K	L	N	Y	T	K	A	E	G	P	A	K	G	Q	P	M	L	N	T	A	I	D	A	A	E	M	I	L	T	L	A
Template Known Secondary structure		T	T	B										G	G	G						T	B			T					T					T	T																		B			S	S	T	T	T	T	S	B	B			S
Template Predicted Secondary structure
Template SS confidence
		880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	T	N	G	H	V	A	V	K	A	W	Q	A	L	G	E	I	T	G	R	E	H	T	H	L	A	L	H	K	E	D	E	K	I	R	F	R	D	I	Q	A	Q	P	R	K	I	I	S	S	P	T	W	S	G	L	E	S	D	H	V	S	Y	N	A	G	Y	T	N	V	H	E	L	I	P	W	R	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	T	N	G	Q	V	A	V	K	A	W	A	A	L	S	E	F	T	G	R	D	H	T	H	L	A	L	N	K	E	D	E	K	I	R	F	R	D	I	Q	A	Q	P	R	K	I	I	S	S	P	T	W	S	G	L	E	D	E	H	V	S	Y	N	A	G	Y	T	N	V	H	E	L	I	P	W	R	T	L	S
Template Known Secondary structure		T	T	T	B																S	S			G	G	G	T	G	G	G	T	T		B									S								T	T	S	S	S				S	S	S				T	T											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	Q	Q	L	Y	Q	D	H	P	W	M	R	A	F	G	E	S	L	V	A	Y	R	P	P	I	D	T	R	S	V	S	E	M	R	Q	I	P	P	N	G	F	P	E	K	A	L	N	F	L	T	P	H	Q	K	W	G	I	H	S	T	Y	S	E	N	L	L	M	L	T	L	S	R	G	G	P	I	V	W	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	Q	Q	L	Y	Q	D	H	Q	W	M	R	D	F	G	E	S	L	L	V	Y	R	P	P	I	D	T	R	S	V	K	E	V	I	G	Q	K	S	N	G	N	Q	E	K	A	L	N	F	L	T	P	H	Q	K	W	G	I	H	S	T	Y	S	D	N	L	L	M	L	T	L	G	R	G	G	P	V	V	W	L
Template Known Secondary structure		S	S	B						S						T	T		S	S												S	T	T	T	T	T	T	T			S	S											B		S	S	S	B	T	T	B	T	T	T								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.
		1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	T	D	A	R	E	L	T	I	V	D	N	D	W	V	E	V	F	N	A	N	G	A	L	T	A	R	A	V	V	S	Q	R	V	P	P	G	M	T	M	M	Y	H	A	Q	E	R	I	M	N	I	P	G	S	E	V	T	G	M	R	G	G	I	H	N	S	V	T	R	V	C	P	K	P	T	H	M	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	A	D	A	K	D	L	G	I	A	D	N	D	W	I	E	V	F	N	S	N	G	A	L	T	A	R	A	V	V	S	Q	R	V	P	A	G	M	T	M	M	Y	H	A	Q	E	R	I	V	N	L	P	G	S	E	I	T	Q	Q	R	G	G	I	H	N	S	V	T	R	I	T	P	K	P	T	H	M	I	G
Template Known Secondary structure										T			T	T								T	T											T	T	S		T	T						B				S	S	S	S			B		T	T	T	S	S	B		B		G	G	G	S							G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.
		1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	A	Q	L	A	W	G	F	N	Y	Y	G	T	V	G	S	N	R	D	E	F	I	M	I	R	K	M	K	N	V	N	W	L	D	D	E	G	R	D	Q	V	Q	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	A	H	L	A	Y	G	F	N	Y	Y	G	T	V	G	S	N	R	D	E	F	V	V	V	R	K	M	K	N	I	D	W	L	D	G	E	G	N	D	Q	V	Q	E	S
Template Known Secondary structure		S	B	T	T	B	S	B		T	T	T	S	S						T	T									S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.